ggKbase home page

bjp_ig2158_scaffold_3721

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3721_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

75..1199
DNA (1125bp) protein (375aa)
mtnA; methylthioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=CG_Anaero_02
Methylthioribose-1-phosphate isomerase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I100_CALAS rbh
mtnA; methylthioribose-1-phosphate isomerase
bjp_ig2158_scaffold_3721_2
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(1233..2126)
DNA (894bp) protein (298aa)
rsmA; ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_Anaero_02
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A id=1801699 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
bjp_ig2158_scaffold_3721_3
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2247..4049)
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5A3_ANATU
lepA; GTP-binding protein LepA
bjp_ig2158_scaffold_3721_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4214..5143)
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS rbh
NAD-dependent epimerase/dehydratase family protein rbh
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL99588.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldili
bjp_ig2158_scaffold_3721_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5388..8477)
DNA (3090bp) protein (1030aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7T4_CALAS rbh
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3721_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


9036..9692
DNA (657bp) protein (219aa)
50S ribosomal protein L25 n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SL37_9CHLR
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=CG_Anaero_02
rplY; 50S ribosomal protein L25
bjp_ig2158_scaffold_3721_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(10057..11379)
DNA (1323bp) protein (441aa)
hypothetical protein; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RBG_16_Chloroflexi_63_12_curated
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7R1_CALAS rbh
hypothetical protein
bjp_ig2158_scaffold_3721_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(12034..14727)
DNA (2694bp) protein (898aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Anaero_02
DNA gyrase subunit A n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7R0_CALAS rbh
gyrA; DNA gyrase subunit A
bjp_ig2158_scaffold_3721_9

Not on your lists

comp(15004..15555)
DNA (552bp) protein (184aa)
GCN5-related N-acetyltransferase n=1 Tax=mine drainage metagenome RepID=T1AWL7_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S21850 {ECO:0000313|EMBL:GAG17082.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
GCN5-like N-acetyltransferase
bjp_ig2158_scaffold_3721_10
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15622..16185)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003798C54
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
hypothetical protein
bjp_ig2158_scaffold_3721_11
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16456..17433)
DNA (978bp) protein (326aa)
Adenine-specific DNA methylase id=4835119 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
adenine-specific DNA methylase Tax=RBG_16_Deltaproteobacteria_58_17_curated
hypothetical protein
bjp_ig2158_scaffold_3721_12
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17630..19477)
DNA (1848bp) protein (616aa)
DNA repair protein RecN n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYI7_CALAS rbh
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=CG_Anaero_02
recN; DNA repair protein RecN
bjp_ig2158_scaffold_3721_13
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(19731..20978)
DNA (1248bp) protein (416aa)
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
major facilitator transporter id=24425455 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative major facilitator superfamily transporter
bjp_ig2158_scaffold_3721_14
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(21161..21523)
DNA (363bp) protein (121aa)
Putative DNA methylase n=1 Tax=planctomycete KSU-1 RepID=I3ILH4_9PLAN
hypothetical protein Tax=RBG_16_Chloroflexi_57_9_curated
hypothetical protein
bjp_ig2158_scaffold_3721_15
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21539..22099)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2M8_CALAS
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3721_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22406..23254)
DNA (849bp) protein (283aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=CG_Anaero_02
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPE8_9CHLR
ppnK; inorganic polyphosphate/ATP-NAD kinase
bjp_ig2158_scaffold_3721_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(23257..26844)
DNA (3588bp) protein (1196aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8G0_CALAS rbh
hypothetical protein Tax=CG_Anaero_02
hypothetical protein rbh
bjp_ig2158_scaffold_3721_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(26989..27342)
DNA (354bp) protein (118aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Anaero_02
Histidine--tRNA ligase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJX5_DEHSV
hisS1; histidyl-tRNA synthetase
bjp_ig2158_scaffold_3721_19
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(27375..28157)
DNA (783bp) protein (261aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Anaero_02
Histidyl-tRNA synthetase n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QB55_9CHLR
histidyl-tRNA synthetase
bjp_ig2158_scaffold_3721_20
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(28350..29336)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6M0_CALAS rbh
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
bjp_ig2158_scaffold_3721_21
unknown

Not on your lists

comp(29748..30527)
DNA (780bp) protein (260aa)

This feature has no annotations

bjp_ig2158_scaffold_3721_22
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(30527..31159)
DNA (633bp) protein (211aa)
Translin family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2P6_CALAS
translin family protein
Translin family protein {ECO:0000313|EMBL:BAL99533.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
bjp_ig2158_scaffold_3721_23
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31724..32077
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FE3_METBF id=5225468 bin=16ft_combo_ws3_JS1 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cell surface protein
Cell surface protein {ECO:0000313|EMBL:AKB46497.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp.
Displaying 23 items

View Taxonomy