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13_1_40cm_4_scaffold_12817

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12817_1
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

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3..167
DNA (165bp) protein (55aa)
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ACO03703.1}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 1
GlnK; nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
13_1_40cm_4_scaffold_12817_2
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(602..952)
DNA (351bp) protein (117aa)
thioredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E511
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
thioredoxin
13_1_40cm_4_scaffold_12817_3
RHI_RIF_OP11_01_44_25, RIF-OP11-1, Microgenomates, Bacteria

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1005..2540
DNA (1536bp) protein (512aa)
Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDY3_9CHLO id=66679 bin=ACD48 species=Micromonas sp. RCC299 genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_44_25_curated
hypothetical protein
13_1_40cm_4_scaffold_12817_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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2542..3003
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9K4_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40497.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_12817_5
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3055..3738)
DNA (684bp) protein (228aa)
Menaquinol-cytochrome c reductase cytochrome b/c subunit n=1 Tax=Clostridium ultunense Esp RepID=M1Z6G7_9CLOT
qcrC; menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC {ECO:0000313|EMBL:AHD05213.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
13_1_40cm_4_scaffold_12817_6
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3735..4430)
DNA (696bp) protein (232aa)
cytochrome B6 n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002D3193D
cytochrome b6
Cytochrome b6 {ECO:0000313|EMBL:AIQ13489.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).
13_1_40cm_4_scaffold_12817_7
Bacillus sp. SG-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4431..4898)
DNA (468bp) protein (156aa)
Cytochrome b6-f complex Fe-S subunit (EC:1.10.9.1)
Rieske 2Fe-2S iron-sulfur protein, putative n=1 Tax=Bacillus sp. SG-1 RepID=A6CL41_9BACI
Rieske 2Fe-2S iron-sulfur protein, putative {ECO:0000313|EMBL:EDL65461.1}; TaxID=161544 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SG-1.;"
13_1_40cm_4_scaffold_12817_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(4980..5936)
DNA (957bp) protein (319aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=GWC2_RIF_CHLX_73_18_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=3440871 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_12817_9
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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6088..7479
DNA (1392bp) protein (464aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E4B3_METRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKQ18724.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)
13_1_40cm_4_scaffold_12817_10
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7479..8339
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00037EB4BA
putative DNA polymerase III subunit
Putative DNA polymerase III subunit {ECO:0000313|EMBL:AHH17125.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
13_1_40cm_4_scaffold_12817_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8155..9243)
DNA (1089bp) protein (363aa)
DNA polymerase IV n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F962_ACIC5
DNA polymerase IV {ECO:0000313|EMBL:AKF09123.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus
DNA-directed DNA polymerase
13_1_40cm_4_scaffold_12817_12
unknown

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comp(9294..9599)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_12817_13
CG_Arma_01, Armatimonadetes, Bacteria

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9672..10418
DNA (747bp) protein (249aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7200681 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
nucleotidyl transferase Tax=CG_Arma_01
rbfA; glucose-1-phosphate thymidylyltransferase
13_1_40cm_4_scaffold_12817_14
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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10433..10879
DNA (447bp) protein (149aa)
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_68_14_curated
spsL; spore coat polysaccharide synthesis protein SpsL (EC:5.1.3.13)
SpsL id=2211342 bin=GWB2_Geobacter-like_52_12 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_12817_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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10876..11187
DNA (312bp) protein (104aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
NAD-dependent epimerase/dehydratase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AUU5_9ZZZZ
Displaying 15 items

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