ggKbase home page

13_1_20cm_3_scaffold_7915

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_7915_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
Glycoside hydrolase, family 3 domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYY5_ROSS1
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ABU57034.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sou
glycoside hydrolase family 3
13_1_20cm_3_scaffold_7915_2
unknown

Not on your lists

comp(482..589)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_3_scaffold_7915_3
unknown

Not on your lists

comp(605..751)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_3_scaffold_7915_4
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(758..1684)
DNA (927bp) protein (309aa)
short-chain dehydrogenase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00031101EC
short-chain dehydrogenase/reductase SDR Tax=GWC2_Nitrospirae_57_9_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_7915_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1810..2826)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAQ0_ANASK
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACG74569.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterac
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_3_scaffold_7915_6
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3068..3784)
DNA (717bp) protein (239aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACC79339.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ACC79339.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" sou
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L4F9_9SYNC
13_1_20cm_3_scaffold_7915_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3906..4301)
DNA (396bp) protein (132aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0A4_9CHLR
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EFH82244.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
cupin
13_1_20cm_3_scaffold_7915_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4642..5589
DNA (948bp) protein (316aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U661_9CHLR
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFH80472.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
DNA-binding domain-containing protein, AraC-type
13_1_20cm_3_scaffold_7915_9
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5993..8944
DNA (2952bp) protein (984aa)
transposase n=1 Tax=Clostridium arbusti RepID=UPI000287E474 rbh
Transposase {ECO:0000313|EMBL:KGP81544.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
transposase Tn3 family protein
13_1_20cm_3_scaffold_7915_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8928..9320)
DNA (393bp) protein (131aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1Y3_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH80867.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
integrase core subunit
13_1_20cm_3_scaffold_7915_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9427..9900)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0S3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82413.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_3_scaffold_7915_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9887..10456)
DNA (570bp) protein (190aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUF2_9CHLR
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFH84020.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;"
glyoxalase
13_1_20cm_3_scaffold_7915_13
unknown

Not on your lists

comp(10495..10692)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_3_scaffold_7915_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10881..11756)
DNA (876bp) protein (292aa)
UbiE/COQ5 methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SN3_RHOFD
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:ABD71220.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrire
UbiE/COQ5 methyltransferase
13_1_20cm_3_scaffold_7915_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12018..12386)
DNA (369bp) protein (123aa)
Transcriptional regulator, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U002_9CHLR
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFH82142.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
transcriptional regulator, LuxR family
13_1_20cm_3_scaffold_7915_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15417..15908
DNA (492bp) protein (164aa)
IS1 transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4V1_9CHLR
IS1 transposase {ECO:0000313|EMBL:EFH81531.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM
IS1 transposase
13_1_20cm_3_scaffold_7915_17
unknown

Not on your lists

comp(15831..16154)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_3_scaffold_7915_18
unknown

Not on your lists

16255..16401
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_3_scaffold_7915_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16398..16796
DNA (399bp) protein (133aa)
Beta-glucosidase {ECO:0000313|EMBL:ACB75473.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ACB75473.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opit
Beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNV3_OPITP
Displaying 19 items

View Taxonomy