ggKbase home page

13_1_20cm_2_scaffold_1562

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1562_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1..756
DNA (756bp) protein (252aa)
aldehyde Dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Aldehyde Dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1X5_SPHTD
aldehyde Dehydrogenase
13_1_20cm_2_scaffold_1562_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(778..1905)
DNA (1128bp) protein (376aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] alias=RBG9_62_16,RBG9_C00062G00016 id=1247318 tax=RBG9 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi rbh
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
13_1_20cm_2_scaffold_1562_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1902..2597)
DNA (696bp) protein (232aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT alias=RBG9_62_15,RBG9_C00062G00015 id=1247317 tax=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
winged helix family two component transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
winged helix family two component transcriptional regulator
13_1_20cm_2_scaffold_1562_4
unknown

Not on your lists

comp(2677..3045)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_1562_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3136..3672)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6BLY0_PSEST
hypothetical protein; K07020 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alpha/beta hydrolase
13_1_20cm_2_scaffold_1562_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3684..4331)
DNA (648bp) protein (216aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NG3_SYMTH
hypothetical protein
13_1_20cm_2_scaffold_1562_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4436..6007)
DNA (1572bp) protein (524aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA polymerase LigD, ligase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H018_CELFA
DNA polymerase LigD, ligase domain-containing protein
13_1_20cm_2_scaffold_1562_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6044..7675
DNA (1632bp) protein (544aa)
Putative lipoprotein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2Z7_STRRD rbh
lipoprotein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lipoprotein
13_1_20cm_2_scaffold_1562_9
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7672..8094
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628CB1
Uncharacterized protein {ECO:0000313|EMBL:KDE99283.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
hypothetical protein
13_1_20cm_2_scaffold_1562_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

8168..9007
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000373FC40
Ku domain-containing protein; K10979 DNA end-binding protein Ku Tax=GWC2_RIF_CHLX_73_18_curated
Ku family containing protein
13_1_20cm_2_scaffold_1562_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

9026..10099
DNA (1074bp) protein (358aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=CSP1_4_Chloroflexi
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003667EC8
DNA ligase D
13_1_20cm_2_scaffold_1562_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10150..11805
DNA (1656bp) protein (552aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=GWC2_RIF_CHLX_73_18_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=bacterium JAD2 RepID=S4WZC8_9CHLR
13_1_20cm_2_scaffold_1562_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11802..12461
DNA (660bp) protein (220aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; C
transaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RU6_SOLUE
13_1_20cm_2_scaffold_1562_14
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

comp(12480..13415)
DNA (936bp) protein (312aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S83_SYMTH
hypothetical protein
13_1_20cm_2_scaffold_1562_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13504..15030)
DNA (1527bp) protein (509aa)
Competence protein ComEC n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3T9_CALAS
ComE-like competence protein; K02238 competence protein ComEC Tax=RBG_16_RIF_CHLX_72_14_curated
comEC; competence protein ComEC
Displaying 15 items

View Taxonomy