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13_1_20cm_2_scaffold_5712

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5712_1
unknown

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1..159
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_2_scaffold_5712_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(156..1427)
DNA (1272bp) protein (424aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTY9_9ACTO
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_2_scaffold_5712_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1454..2596
DNA (1143bp) protein (381aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_5712_4
unknown

Not on your lists

comp(2593..2862)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_5712_5
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3060..3533
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DX25_COREQ
Uncharacterized protein {ECO:0000313|EMBL:CBH47803.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebac
hypothetical protein
13_1_20cm_2_scaffold_5712_6
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

3567..4073
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I152_CALAS
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_20cm_2_scaffold_5712_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4106..4996)
DNA (891bp) protein (297aa)
Copper amine oxidase-like domain-containing protein n=1 Tax=Thermobacillus composti KWC4 RepID=G4EFZ0_9BACL alias=RAAC2_WWE3_C00001G00260,RAAC2_WWE3_260 id=725307 tax=RAAC2_WWE3 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Copper amine oxidase-like protein
13_1_20cm_2_scaffold_5712_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5403..5822)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F5F45B
isoprenylcysteine carboxyl methyltransferase family protein Tax=RBG_16_Betaproteobacteria_64_18_curated
protein-S-isoprenylcysteine methyltransferase
13_1_20cm_2_scaffold_5712_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5865..7241)
DNA (1377bp) protein (459aa)
Integral membrane protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P920_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_5712_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7267..7773)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19297.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
13_1_20cm_2_scaffold_5712_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7836..8246
DNA (411bp) protein (137aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_5712_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8258..9598
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4X1_SPHTD
putative protease/transporter; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_5712_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9599..10474
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI0003759715
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
SPFH domain, Band 7 family protein
13_1_20cm_2_scaffold_5712_14
unknown

Not on your lists

10596..12743
DNA (2148bp) protein (716aa)

This feature has no annotations

13_1_20cm_2_scaffold_5712_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13113..13709
DNA (597bp) protein (199aa)
CDC9; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MD77_9ACTO
ATP-dependent DNA ligase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_5712_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13723..14994
DNA (1272bp) protein (424aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glutamate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL6_THET1
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_5712_17
unknown

Not on your lists

comp(15008..16114)
DNA (1107bp) protein (369aa)

This feature has no annotations

13_1_20cm_2_scaffold_5712_18
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

16216..17937
DNA (1722bp) protein (574aa)
DnaQ exonuclease/DinG helicase family protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RBG_13_Chloroflexi_68_17_curated
atm:ANT_15410 DnaQ exonuclease/DinG helicase family protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] alias=RBG9_59_187,RBG9_C00059G00187 id=1247109 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
DNA polymerase III subunit epsilon
Displaying 18 items

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