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13_1_40cm_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_131_1
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..1413)
DNA (1413bp) protein (471aa)
ATP-dependent helicase n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036E17B7
ATP-dependent helicase {ECO:0000313|EMBL:EXX90672.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
DEAD/DEAH box helicase
13_1_40cm_scaffold_131_2
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1469..2005
DNA (537bp) protein (179aa)
RNA polymerase sigma factor SigM n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDX8_MYCPH
RNA polymerase sigma factor SigM {ECO:0000313|EMBL:EID09331.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM6
sigma-70 family RNA polymerase sigma factor
13_1_40cm_scaffold_131_3
unknown

Not on your lists

2150..2608
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_scaffold_131_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2674..4074)
DNA (1401bp) protein (467aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Putative tRNA synthetases class I (C) catalytic domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG2_9ZZZZ
13_1_40cm_scaffold_131_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4087..5091
DNA (1005bp) protein (335aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MoeA; molybdopterin biosynthesis enzyme
13_1_40cm_scaffold_131_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5347..6729
DNA (1383bp) protein (461aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625321 bin=bin7_NC10_sister species=Smithella sp. ME-1 genus=Smithella taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_131_7
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6726..6986)
DNA (261bp) protein (87aa)
source missing description 1..42 Tax=CG_Dehalo_02
13_1_40cm_scaffold_131_8
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7003..7911
DNA (909bp) protein (303aa)
threonine dehydratase n=1 Tax=Mycobacterium hassiacum RepID=UPI00037C6F0C
Pyridoxal-phosphate dependent enzyme family protein {ECO:0000313|EMBL:EKF21362.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycoba
pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_scaffold_131_9
unknown

Not on your lists

comp(7904..8617)
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_40cm_scaffold_131_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

8638..10233
DNA (1596bp) protein (532aa)
Amidohydrolase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY45_THERP
amidohydrolase family protein
Amidohydrolase family {ECO:0000313|EMBL:ACM05783.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
13_1_40cm_scaffold_131_11
unknown

Not on your lists

comp(10163..10639)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_scaffold_131_12
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10704..11210
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0Q2_CALAS
putative transcriptional regulator Tax=RBG_13_Deltaproteobacteria_65_10_curated
hypothetical protein
13_1_40cm_scaffold_131_13
unknown

Not on your lists

comp(11517..11702)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_scaffold_131_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11727..13028
DNA (1302bp) protein (434aa)
Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKS4_ROSCS
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus c
13_1_40cm_scaffold_131_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13036..14097
DNA (1062bp) protein (354aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Frankia sp. QA3 RepID=I8QVT6_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABW15481.1}; Flags: Precursor;; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EA
13_1_40cm_scaffold_131_16
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14094..15143
DNA (1050bp) protein (350aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA51_DESAA
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACL03147.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" so
13_1_40cm_scaffold_131_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15280..16227
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036AADD4
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ETK38096.1}; Flags: Fragment;; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Mi
aminoglycoside phosphotransferase
13_1_40cm_scaffold_131_18
unknown

Not on your lists

comp(16610..17032)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_scaffold_131_19
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

17339..18343
DNA (1005bp) protein (335aa)
guaB; IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
IMP dehydrogenase family protein id=3175544 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
IMP dehydrogenase family protein
13_1_40cm_scaffold_131_20
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

18393..19934
DNA (1542bp) protein (514aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Chloroflexi_57_8_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K041_DEHLB
GMP synthase
13_1_40cm_scaffold_131_21
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

19925..20770
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000361970F
prenyltransferase and squalene oxidase repeat protein Tax=RBG_16_Zixibacteria_53_22_curated
hypothetical protein
13_1_40cm_scaffold_131_22
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20767..22038
DNA (1272bp) protein (424aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHD0_ANAD2
13_1_40cm_scaffold_131_23
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

22038..22502
DNA (465bp) protein (155aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_16_Chloroflexi_58_8_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=6 Tax=Listeria monocytogenes RepID=B8DDY2_LISMH
13_1_40cm_scaffold_131_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22502..24298
DNA (1797bp) protein (599aa)
oxaloacetate decarboxylase subunit alpha (EC:6.4.1.1)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D766_METSW
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_40cm_scaffold_131_25
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24295..25758
DNA (1464bp) protein (488aa)
pyruvate carboxylase subunit A (EC:6.4.1.1)
Pyruvate carboxylase subunit A {ECO:0000313|EMBL:ABE53277.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ABE53277.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
Pyruvate carboxylase subunit A n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TE9_METBU
13_1_40cm_scaffold_131_26
Sutterella parvirubra, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25797..26318
DNA (522bp) protein (174aa)
Hydrolase, NUDIX family n=1 Tax=Sutterella parvirubra YIT 11816 RepID=H3KH23_9BURK
Hydrolase, NUDIX family {ECO:0000313|EMBL:EHY30589.1}; TaxID=762967 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella parvirubra
ADP-ribose pyrophosphatase
13_1_40cm_scaffold_131_27
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(26315..28516)
DNA (2202bp) protein (734aa)
Periplasmic component of the Tol biopolymer transport system-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F907_CONWI
Periplasmic component of the Tol biopolymer transport system-like protein
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
13_1_40cm_scaffold_131_28
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28513..29070)
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu
13_1_40cm_scaffold_131_29
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29310..30617
DNA (1308bp) protein (436aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CDX04121.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CDX04121.1}
adenylosuccinate lyase n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003677FF5
hypothetical protein
13_1_40cm_scaffold_131_30
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

30614..31531
DNA (918bp) protein (306aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF20_9CHLR
Displaying items 1-30 of 52 in total

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