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13_1_40cm_3_scaffold_1030

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1030_1
unknown

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_3_scaffold_1030_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(160..1077)
DNA (918bp) protein (306aa)
Putative oxidoreductase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A7Q1_9ACTN
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative oxidoreductase
13_1_40cm_3_scaffold_1030_3
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1164..2789
DNA (1626bp) protein (542aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PZD6_9FIRM
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEM74154.1}; Flags: Precursor;; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Famil
13_1_40cm_3_scaffold_1030_4

Not on your lists

2848..3774
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C510_SPHTD
Marine sediment metagenome DNA, contig: S01H4_C00393 {ECO:0000313|EMBL:GAG71751.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_1030_5
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

3771..4739
DNA (969bp) protein (323aa)
diguanylate cyclase n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B51BB3
peptide ABC transporter permease
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_40cm_3_scaffold_1030_6
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5196..5783)
DNA (588bp) protein (196aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:00
isopropylmalate isomerase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036B2F5B
13_1_40cm_3_scaffold_1030_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5783..7189)
DNA (1407bp) protein (469aa)
isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CMP7_MYCTH
13_1_40cm_3_scaffold_1030_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7206..8666)
DNA (1461bp) protein (487aa)
GntR family transcriptional regulator (EC:2.6.1.39) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
aspartate aminotransferase n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0003130DA2 rbh
class I and II aminotransferase
13_1_40cm_3_scaffold_1030_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8663..9940)
DNA (1278bp) protein (426aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Threonine synthase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1B4_ACIFD
threonine synthase
13_1_40cm_3_scaffold_1030_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

10232..11365
DNA (1134bp) protein (378aa)
solA; N-methyltryptophan oxidase (EC:1.5.3.1)
Sarcosine oxidase {ECO:0000313|EMBL:ABU59443.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ABU59443.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; R
Sarcosine oxidase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPE7_ROSCS
13_1_40cm_3_scaffold_1030_11
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

11367..13043
DNA (1677bp) protein (559aa)
Extracellular solute-binding protein family 5 n=2 Tax=Chloroflexus RepID=A9WKA8_CHLAA
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Chloroflexi_56_8_curated
extracellular solute-binding protein
13_1_40cm_3_scaffold_1030_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

13099..14406
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW85_SORCE rbh
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1030_13
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

14435..15298
DNA (864bp) protein (288aa)
Branched-chain amino acid transport system permease protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SBF7_9CHLR rbh
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1030_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

15295..16266
DNA (972bp) protein (324aa)
Inner-membrane translocator n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFJ5_ARCPA rbh
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
inner-membrane translocator
13_1_40cm_3_scaffold_1030_15
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16263..17012
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFJ6_ARCPA
hypothetical protein Tax=CG_Anaero_02
ABC transporter
13_1_40cm_3_scaffold_1030_16
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

17009..17236
DNA (228bp) protein (76aa)
ABC transporter related protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFJ7_ARCPA
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB58891.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus pro
13_1_40cm_3_scaffold_1030_17
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17233..17667
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVV1_SORCE
hypothetical protein Tax=CG_Anaero_01
hypothetical protein
13_1_40cm_3_scaffold_1030_18
unknown

Not on your lists

18333..18581
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_3_scaffold_1030_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(18545..20203)
DNA (1659bp) protein (553aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMI8_9BACT
13_1_40cm_3_scaffold_1030_20
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20217..20597)
DNA (381bp) protein (127aa)
2-isopropylmalate synthase (EC:2.3.3.13) Tax=CG_Mariprof_01
Pyruvate carboxyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV6_THET1
pyruvate carboxyltransferase
Displaying 20 items

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