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scnpilot_cont_500_p_scaffold_1191

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1191_1
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1184)
DNA (1182bp) protein (394aa)
ferroxidase (EC:1.16.3.1)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003790E66 rbh
Multicopper oxidase {ECO:0000313|EMBL:EWT01384.1}; Flags: Fragment;; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryz
scnpilot_cont_500_p_scaffold_1191_2
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1280..6985)
DNA (5706bp) protein (1902aa)
pectin lyase-like protein (EC:4.2.2.-)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXE0_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23197.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylo
scnpilot_cont_500_p_scaffold_1191_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7595..8248)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF57190.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3
two component LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1191_4

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comp(8283..10526)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002DF4194
Marine sediment metagenome DNA, contig: S01H1_L00960 {ECO:0000313|EMBL:GAF72731.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
multi-sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_1191_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10658..11920)
DNA (1263bp) protein (421aa)
PbrT family lead (Pb2+) uptake porter n=1 Tax=Neisseria shayeganii 871 RepID=G4CHZ7_9NEIS
Iron transporter {ECO:0000313|EMBL:KIZ47247.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
efeO; hypothetical protein
scnpilot_cont_500_p_scaffold_1191_6
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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12497..12847
DNA (351bp) protein (117aa)
Transposase n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H1J5_DEIGI
transposase
Transposase {ECO:0000313|EMBL:AFD27392.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 2139
scnpilot_cont_500_p_scaffold_1191_7
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(13040..15862)
DNA (2823bp) protein (941aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:BAL59164.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1191_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

16025..17446
DNA (1422bp) protein (474aa)
lignostilbene-alpha,beta-dioxygenase (EC:1.13.11.-)
Carotenoid oxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJN0_9CHLR rbh
Carotenoid oxygenase {ECO:0000313|EMBL:EFH89637.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
scnpilot_cont_500_p_scaffold_1191_9
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17646..18338
DNA (693bp) protein (231aa)
UPI0003D5D3C9 related cluster n=1 Tax=unknown RepID=UPI0003D5D3C9
Uncharacterized protein {ECO:0000313|EMBL:KIL42006.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1191_10
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(18791..21757)
DNA (2967bp) protein (989aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VSK2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB89860.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
Displaying 10 items

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