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scnpilot_cont_500_p_scaffold_1335

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1335_1
bacterium UASB270, Bacteria

Not on your lists

2..2140
DNA (2139bp) protein (713aa)
Cyclic nucleotide-binding protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UGG5_CYAP2 rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:GAK56986.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
cyclic nucleotide-binding protein
scnpilot_cont_500_p_scaffold_1335_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(2317..3330)
DNA (1014bp) protein (338aa)
Oxidoreductase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBI9_9CHLR rbh
oxidoreductase domain-containing protein Tax=CG_Arma_01
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_1335_3
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3498..5198)
DNA (1701bp) protein (567aa)
Peptidase S53 propeptide n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TDV3_BURPP rbh
peptidase S53 propeptide
Peptidase S53 propeptide {ECO:0000313|EMBL:ACD19143.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phyt
scnpilot_cont_500_p_scaffold_1335_4
unknown

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comp(5330..5641)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1335_5
unknown

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comp(5937..6479)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1335_6

Not on your lists

comp(6547..6921)
DNA (375bp) protein (125aa)
XRE family transcriptional regulator
Marine sediment metagenome DNA, contig: S03H2_S06717 {ECO:0000313|EMBL:GAH49828.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
scnpilot_cont_500_p_scaffold_1335_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7298..8863)
DNA (1566bp) protein (522aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTC1_9CHLR rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH83672.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
major facilitator transporter rbh
scnpilot_cont_500_p_scaffold_1335_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9094..9531)
DNA (438bp) protein (146aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTC2_9CHLR
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EFH83673.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedon
polyketide cyclase
scnpilot_cont_500_p_scaffold_1335_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..9905)
DNA (372bp) protein (124aa)
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3P0_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGM33519.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="In
ArsR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1335_10
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10044..11783)
DNA (1740bp) protein (580aa)
ABC transporter related protein n=1 Tax=Paenibacillus vortex V453 RepID=E5YWW6_9BACL rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKE97893.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_1335_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12237..12995)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain alcohol dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
short-chain alcohol dehydrogenase
scnpilot_cont_500_p_scaffold_1335_12
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13083..13400)
DNA (318bp) protein (106aa)
Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenobaculum RepID=M1R900_9AQUI
General stress protein 16O {ECO:0000313|EMBL:CEI81510.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
transcriptional regulator, TraR/DksA family
scnpilot_cont_500_p_scaffold_1335_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13770..15395)
DNA (1626bp) protein (542aa)
Cyclohexanone monooxygenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NW53_9DELT
Cyclohexanone monooxygenase {ECO:0000313|EMBL:EPX56445.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source
FAD dependent oxidoreductase
scnpilot_cont_500_p_scaffold_1335_14
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15643..17733
DNA (2091bp) protein (697aa)
LPS biosynthesis protein , RfbU family n=3 Tax=Clostridium acetobutylicum RepID=F0KB97_CLOAE rbh
RfbU family LPS biosynthesis protein
LPS biosynthesis protein , RfbU family {ECO:0000313|EMBL:AAK80300.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobut
scnpilot_cont_500_p_scaffold_1335_15
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17818..19365
DNA (1548bp) protein (516aa)
Glycosyl transferase n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UAE6_9CHRO
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AFY91603.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
scnpilot_cont_500_p_scaffold_1335_16
unknown

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comp(19576..19764)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 16 items

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