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scnpilot_cont_500_p_scaffold_1429

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1429_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1878
DNA (1878bp) protein (626aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08161.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Cytochrome c-type biogenesis protein CcmF id=2289613 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
cycK; cytochrome c-type biogenesis protein cycK
scnpilot_cont_500_p_scaffold_1429_2
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

1888..2577
DNA (690bp) protein (230aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_9_curated
scnpilot_cont_500_p_scaffold_1429_3
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2637..3974
DNA (1338bp) protein (446aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
N-ethylammeline chlorohydrolase (EC:3.5.4.28) rbh
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0D5Y4_9BACL rbh
scnpilot_cont_500_p_scaffold_1429_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4002..4778
DNA (777bp) protein (259aa)
Heme exporter protein CcmA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3N0_SPHTD
heme exporter protein CcmA
Heme exporter protein CcmA {ECO:0000313|EMBL:ACZ38847.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" so
scnpilot_cont_500_p_scaffold_1429_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

4886..5629
DNA (744bp) protein (248aa)
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RBG_16_Chloroflexi_57_9_curated
cytochrome c-type biogenesis protein CcmB; K02194 heme exporter protein B id=14426404 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c-type biogenesis protein CcmB
scnpilot_cont_500_p_scaffold_1429_6
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5737..6486
DNA (750bp) protein (250aa)
cytochrome c assembly protein; K02195 heme exporter protein C id=14424390 bin=bin1_lowGC species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP
ccmC; heme exporter protein CcmC
Tax=BJP_08E140C01_Anaerolineales_40_8
scnpilot_cont_500_p_scaffold_1429_7
unknown

Not on your lists

6483..6800
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1429_8
unknown

Not on your lists

7011..7700
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1429_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7722..8693)
DNA (972bp) protein (324aa)
Ketopantoate reductase ApbA/PanE domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUN0_9CHLR rbh
Ketopantoate reductase ApbA/PanE domain protein {ECO:0000313|EMBL:EFH84098.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou
alpha/beta fold family hydrolase
scnpilot_cont_500_p_scaffold_1429_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8849..9442
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUN1_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH84099.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
bacterial regulatory s, tetR family protein
scnpilot_cont_500_p_scaffold_1429_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9516..11843)
DNA (2328bp) protein (776aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46B94_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB58128.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina b
scnpilot_cont_500_p_scaffold_1429_12
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11986..12273)
DNA (288bp) protein (96aa)
CsbD family protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TCF0_AMYOR
hypothetical protein
CsbD family protein {ECO:0000313|EMBL:AGM08118.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;
scnpilot_cont_500_p_scaffold_1429_13
unknown

Not on your lists

12518..13564
DNA (1047bp) protein (349aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1429_14
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13671..14444)
DNA (774bp) protein (258aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUF7_CLOCD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AEV70605.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcac
scnpilot_cont_500_p_scaffold_1429_15
Shewanella xiamenensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14795..15178
DNA (384bp) protein (128aa)
Response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CWD2_MYXXD
Response regulator {ECO:0000313|EMBL:KEK28132.1}; TaxID=332186 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella xiamenensis.;"
response regulator
scnpilot_cont_500_p_scaffold_1429_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15191..16321)
DNA (1131bp) protein (377aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexacea
DNA methylase N-4/N-6 domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKK8_ROSCS rbh
DNA methylase N-4/N-6 domain-containing protein
scnpilot_cont_500_p_scaffold_1429_17
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16524..17381
DNA (858bp) protein (286aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1123016 species="Bacteria; Prot
glutamate racemase n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI00028A219B
glutamate racemase
scnpilot_cont_500_p_scaffold_1429_18
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17396..17806)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Lactococcus lactis RepID=UPI00034C6702
ycfH; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK04358.1}; TaxID=272623 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis (
scnpilot_cont_500_p_scaffold_1429_19
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17919..18719)
DNA (801bp) protein (267aa)
Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXZ2_HERA2
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABX04958.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpeto
scnpilot_cont_500_p_scaffold_1429_20
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(18760..19227)
DNA (468bp) protein (156aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RBG_13_Chloroflexi_56_8_curated
Molybdopterin molybdochelatase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPI4_ROSS1
molybdenum cofactor synthesis domain-containing protein
Displaying 20 items

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