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scnpilot_cont_500_p_scaffold_2031

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2031_1
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(3..569)
DNA (567bp) protein (189aa)
pyk; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJT2_GEOS8
scnpilot_cont_500_p_scaffold_2031_2
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(619..2121)
DNA (1503bp) protein (501aa)
PQQ repeat protein n=2 Tax=Arthrospira platensis RepID=D5A6C9_ARTPN
PQQ repeat protein
PQQ repeat protein {ECO:0000313|EMBL:BAI93762.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 /
scnpilot_cont_500_p_scaffold_2031_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2263..3513)
DNA (1251bp) protein (417aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDM0_9CHLR rbh
argininosuccinate synthase
scnpilot_cont_500_p_scaffold_2031_4
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4108..5565)
DNA (1458bp) protein (486aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2T2_ANATU rbh
scnpilot_cont_500_p_scaffold_2031_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5555..6439)
DNA (885bp) protein (295aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:ABQ91399.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABQ91399.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseifl
Serine acetyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXP6_ROSS1 rbh
serine O-acetyltransferase
scnpilot_cont_500_p_scaffold_2031_6
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(6722..7057)
DNA (336bp) protein (112aa)
Regulatory protein, FmdB family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C459_SPHTD
FmdB family regulatory protein Tax=RBG_16_Actinobacteria_64_13_curated
FmdB family regulatory protein
scnpilot_cont_500_p_scaffold_2031_7
unknown

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comp(7204..8667)
DNA (1464bp) protein (488aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2031_8
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8655..9251)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000380E4EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ22553.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
scnpilot_cont_500_p_scaffold_2031_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9445..10212
DNA (768bp) protein (256aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1A8_ROSS1
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABU60444.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflex
scnpilot_cont_500_p_scaffold_2031_10

Not on your lists

10314..10976
DNA (663bp) protein (221aa)
RNA polymerase sigma-W factor n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NDZ3_9ACTO
Marine sediment metagenome DNA, contig: S12H4_S11850 {ECO:0000313|EMBL:GAJ15993.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
RNA polymerase subunit sigma-24
scnpilot_cont_500_p_scaffold_2031_11
unknown

Not on your lists

10957..11814
DNA (858bp) protein (286aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2031_12
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(12039..13445)
DNA (1407bp) protein (469aa)
major facilitator transporter; K06902 MFS transporter, UMF1 family Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Permeases of the major facilitator superfamily
Major facilitator superfamily MFS_1 id=1800001 bin=GWE2_Gammaproteobacteria_42_36 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
scnpilot_cont_500_p_scaffold_2031_13
unknown

Not on your lists

13505..13759
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2031_14
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..14505)
DNA (750bp) protein (250aa)
phosphoglycolate phosphatase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036AF6D6
Phosphoglycolate phosphatase {ECO:0000313|EMBL:KGK41176.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
phosphoglycolate phosphatase
scnpilot_cont_500_p_scaffold_2031_15
unknown

Not on your lists

comp(14676..14984)
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2031_16
unknown

Not on your lists

comp(15182..15274)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 16 items

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