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scnpilot_cont_500_p_scaffold_4223

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4223_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(3..629)
DNA (627bp) protein (209aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RBG_16_Armatimonadetes_67_12_curated
N-acyl-D-amino-acid deacylase id=3228010 bin=GWF2_Methylomirabilis_70_14 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ndaD; d-aminoacylase (aspartate, glutamate ETC)
scnpilot_cont_500_p_scaffold_4223_2
unknown

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902..1144
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4223_3
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1213..2007)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI00037380D7
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
scnpilot_cont_500_p_scaffold_4223_4
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2007..2957)
DNA (951bp) protein (317aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CAV3_STRBB rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ADI08670.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchengge
scnpilot_cont_500_p_scaffold_4223_5
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3039..3566)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036B7975
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD45220.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
scnpilot_cont_500_p_scaffold_4223_6
unknown

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4116..4691
DNA (576bp) protein (192aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4223_7

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comp(4789..5613)
DNA (825bp) protein (275aa)
ABC-2 type transporter, transmembrane subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB8_METBU
Marine sediment metagenome DNA, contig: S06H3_C01587 {ECO:0000313|EMBL:GAH97948.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ABC transporter, inner membrane subunit
scnpilot_cont_500_p_scaffold_4223_8
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(5646..6620)
DNA (975bp) protein (325aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K09695 lipooligosaccharide transport system ATP-binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter-related protein; K09695 lipooligosaccharide transport system ATP-binding protein id=14424633 bin=bin1_lowGC species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP rbh
scnpilot_cont_500_p_scaffold_4223_9
unknown

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comp(6895..7290)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4223_10
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7541..8812
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037DF8D7 rbh
FAD binding domain protein {ECO:0000313|EMBL:EDY80734.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
sorbitol oxidase
scnpilot_cont_500_p_scaffold_4223_11
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8819..9283)
DNA (465bp) protein (155aa)
aldo/keto reductase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI000377A88B
Aldo-keto reductase
Aldo-keto reductase {ECO:0000313|EMBL:AJC58470.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
Displaying 11 items

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