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scnpilot_cont_500_p_scaffold_4668

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4668_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1..696
DNA (696bp) protein (232aa)
Transcriptional regulator, MerR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6N1_9CHLR
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFH80642.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
scnpilot_cont_500_p_scaffold_4668_2
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

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749..1561
DNA (813bp) protein (271aa)
Transcriptional regulator n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YZW0_NOSS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAB72303.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
scnpilot_cont_500_p_scaffold_4668_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1595..1981
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYT4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90350.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
scnpilot_cont_500_p_scaffold_4668_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2106..2537)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA88_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40731.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
scnpilot_cont_500_p_scaffold_4668_5
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2568..3197)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003667B14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY73516.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
scnpilot_cont_500_p_scaffold_4668_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3297..4217)
DNA (921bp) protein (307aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4Z5_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH81575.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; K
RNA polymerase, sigma-24 subunit, ECF subfamily
scnpilot_cont_500_p_scaffold_4668_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4395..4862)
DNA (468bp) protein (156aa)
membrane protein n=1 Tax=Lactobacillus pobuzihii RepID=UPI000379581D
Uncharacterized protein {ECO:0000313|EMBL:ERI89697.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
putative membrane protein
scnpilot_cont_500_p_scaffold_4668_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4912..5763)
DNA (852bp) protein (284aa)
Conserved domain protein, putative n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R9A6_9THEO rbh
Conserved domain protein, putative {ECO:0000313|EMBL:EEB75497.1}; Permease {ECO:0000313|EMBL:KKC30864.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
permease
scnpilot_cont_500_p_scaffold_4668_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6084..6776)
DNA (693bp) protein (231aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJV5_9CHLR
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EFH89712.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
NAD-dependent dehydratase
scnpilot_cont_500_p_scaffold_4668_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6801..8024)
DNA (1224bp) protein (408aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ETX03444.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
scnpilot_cont_500_p_scaffold_4668_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(8079..8561)
DNA (483bp) protein (161aa)
Ferric uptake regulator, Fur family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T5_SPHTD
ferric uptake regulator, Fur family
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACZ39252.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobac
scnpilot_cont_500_p_scaffold_4668_12
unknown

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comp(8656..8982)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4668_13
unknown

Not on your lists

9235..9450
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4668_14
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9618..10187
DNA (570bp) protein (190aa)
TPR repeat-containing protein n=2 Tax=Ochrobactrum anthropi RepID=A6WYQ5_OCHA4
hypothetical protein
GlcNAc transferase {ECO:0000313|EMBL:EXL08444.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
scnpilot_cont_500_p_scaffold_4668_15
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10448..13438
DNA (2991bp) protein (997aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AL12_9PROT rbh
Histidine kinase {ECO:0000313|EMBL:GAO36210.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PAS/PAC sensor hybrid histidine kinase
scnpilot_cont_500_p_scaffold_4668_16
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13514..15247
DNA (1734bp) protein (578aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3T2_9PROT rbh
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:BAN35292.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuri
Displaying 16 items

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