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scnpilot_cont_500_p_scaffold_3182

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3182_1
unknown

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comp(104..316)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3182_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(499..1860)
DNA (1362bp) protein (454aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sph
Tryptophan synthase beta chain n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C961_SPHTD rbh
pyridoxal-phosphate dependent TrpB-like enzyme
scnpilot_cont_500_p_scaffold_3182_3
unknown

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comp(2070..2225)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3182_4
unknown

Not on your lists

comp(2216..2407)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3182_5

Not on your lists

2721..3422
DNA (702bp) protein (234aa)
LuxR family DNA-binding response regulator n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QCU7_9CHLR
Marine sediment metagenome DNA, contig: S06H3_S12094 {ECO:0000313|EMBL:GAI42971.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
chemotaxis protein CheY
scnpilot_cont_500_p_scaffold_3182_6
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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3427..4674
DNA (1248bp) protein (416aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEG1_9CHLR
two-component system sensor kinase Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
GAF sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_3182_7
unknown

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4936..5271
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3182_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5276..6196)
DNA (921bp) protein (307aa)
putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Phosphatidate cytidylyltransferase id=4391920 bin=GWC2_Methylomirabilis_70_16 species=Cellulomonas flavigena genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
scnpilot_cont_500_p_scaffold_3182_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6199..8745)
DNA (2547bp) protein (849aa)
AMP-dependent synthetase and ligase:phospholipid/glycerol acyltransferase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14628681 bin=bin8_Chloro species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi rbh
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein
scnpilot_cont_500_p_scaffold_3182_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8813..9469)
DNA (657bp) protein (219aa)
phosphatidylglycerophosphate synthase id=14625907 bin=bin7_NC10_sister species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphatidylglycerophosphate synthase Tax=CSP1_6_Rokubacteria
phosphatidylglycerophosphate synthase
scnpilot_cont_500_p_scaffold_3182_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9757..11169)
DNA (1413bp) protein (471aa)
AAA ATPase, central domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUD4_ROSS1
ATPase central domain-containing protein
AAA ATPase, central domain protein {ECO:0000313|EMBL:ABQ90237.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Rose
Displaying 11 items

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