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SCNPILOT_CONT_500_P_Chloroflexi-like_54_4

SCNPILOT_CONT_500_P_Bacteria_54_4
In projects: SCNPILOT_CONT_500_P  |  chloroflexi

Consensus taxonomy: Bacteria

Taxonomy override: Chloroflexi

Description

highly fragmented, from ESOM

Displaying items 401-450 of 660 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_cont_500_p_scaffold_2557
Domain: Bacteria (66.67%)
12 13031 bp 48.52 4.49 76.69
scnpilot_cont_500_p_scaffold_2072
Domain: Bacteria (86.67%)
15 15095 bp 55.06 4.49 88.20
scnpilot_cont_500_p_scaffold_2349
Domain: Bacteria (73.33%)
15 20281 bp 54.74 4.49 84.37
scnpilot_cont_500_p_scaffold_547
Phylum: Chloroflexi (51.85%)
27 35091 bp 49.23 4.49 79.59
scnpilot_cont_500_p_scaffold_1292
Domain: Bacteria (68.18%)
22 27590 bp 53.94 4.49 89.61
scnpilot_cont_500_p_scaffold_2205
Domain: Bacteria (81.82%)
11 14470 bp 51.71 4.49 75.67
scnpilot_cont_500_p_scaffold_1832
Domain: Bacteria (75%)
12 16206 bp 57.36 4.49 83.97
scnpilot_cont_500_p_scaffold_4914
Domain: Bacteria (100%)
7 7754 bp 53.53 4.49 89.14
scnpilot_cont_500_p_scaffold_4466
Domain: Bacteria (100%)
6 8437 bp 53.93 4.50 83.99
scnpilot_cont_500_p_scaffold_2073
Domain: Bacteria (100%)
13 16055 bp 56.89 4.50 92.51
scnpilot_cont_500_p_scaffold_7702
Phylum: Chloroflexi (75%)
4 5234 bp 53.48 4.50 82.19
scnpilot_cont_500_p_scaffold_555
Phylum: Chloroflexi (54.84%)
31 34738 bp 53.29 4.50 86.90
scnpilot_cont_500_p_scaffold_9607
Phylum: Chloroflexi (50%)
4 4402 bp 55.57 4.50 91.19
scnpilot_cont_500_p_scaffold_5879
Domain: Bacteria (55.56%)
9 8068 bp 56.82 4.50 88.83
scnpilot_cont_500_p_scaffold_4437
Domain: Bacteria (66.67%)
9 8492 bp 52.83 4.50 75.39
scnpilot_cont_500_p_scaffold_2782
Domain: Bacteria (75%)
8 12313 bp 52.79 4.50 79.21
scnpilot_cont_500_p_scaffold_4709
Class: Actinobacteria (57.14%)
7 8043 bp 54.21 4.51 92.17
scnpilot_cont_500_p_scaffold_4336
Domain: Bacteria (78.26%)
23 18719 bp 53.87 4.51 83.53
scnpilot_cont_500_p_scaffold_2943
Domain: Bacteria (83.33%)
12 11833 bp 54.76 4.51 83.11
scnpilot_cont_500_p_scaffold_1628
Domain: Bacteria (85.71%)
14 17611 bp 54.12 4.51 89.86
scnpilot_cont_500_p_scaffold_2605
Domain: Bacteria (77.78%)
9 12883 bp 56.22 4.52 89.19
scnpilot_cont_500_p_scaffold_2882
Domain: Bacteria (100%)
9 11984 bp 47.42 4.52 79.03
scnpilot_cont_500_p_scaffold_1756
Domain: Bacteria (85.71%)
28 33142 bp 56.11 4.52 88.73
scnpilot_cont_500_p_scaffold_2459
Domain: Bacteria (83.33%)
12 13406 bp 52.13 4.52 87.68
scnpilot_cont_500_p_scaffold_608
Phylum: Chloroflexi (55.17%)
29 32881 bp 54.24 4.52 88.28
scnpilot_cont_500_p_scaffold_1362
Domain: Bacteria (88.89%)
18 19899 bp 56.74 4.52 85.87
scnpilot_cont_500_p_scaffold_3498
Domain: Bacteria (88.24%)
17 28528 bp 53.02 4.53 91.91
scnpilot_cont_500_p_scaffold_2304
Domain: Bacteria (87.5%)
16 19794 bp 56.67 4.53 89.44
scnpilot_cont_500_p_scaffold_3766
Domain: Bacteria (76.47%)
17 18874 bp 55.87 4.53 83.42
scnpilot_cont_500_p_scaffold_1699
Domain: Bacteria (50%)
18 17127 bp 41.92 4.53 91.47
scnpilot_cont_500_p_scaffold_3086
Domain: Bacteria (58.62%)
29 27712 bp 56.20 4.53 85.37
scnpilot_cont_500_p_scaffold_1334
Domain: Bacteria (66.67%)
21 24745 bp 55.15 4.53 82.89
scnpilot_cont_500_p_scaffold_7296
Domain: Bacteria (83.33%)
6 5465 bp 59.25 4.53 87.94
scnpilot_cont_500_p_scaffold_4668
Domain: Bacteria (81.25%)
16 15249 bp 54.74 4.53 88.12
scnpilot_cont_500_p_scaffold_5388
Phylum: Chloroflexi (50%)
6 7152 bp 53.38 4.53 79.28
scnpilot_cont_500_p_scaffold_7119
Phylum: Chloroflexi (50%)
6 8715 bp 56.73 4.54 72.77
scnpilot_cont_500_p_scaffold_6238 5 6283 bp 50.60 4.54 81.65
scnpilot_cont_500_p_scaffold_4741
Phylum: Chloroflexi (55.56%)
9 7997 bp 52.82 4.54 79.38
scnpilot_cont_500_p_scaffold_3529
Domain: Bacteria (80%)
10 10275 bp 57.50 4.54 88.99
scnpilot_cont_500_p_scaffold_1474
Domain: Bacteria (83.33%)
24 26573 bp 54.70 4.54 83.92
scnpilot_cont_500_p_scaffold_4544
Domain: Bacteria (81.82%)
11 8320 bp 52.07 4.54 82.93
scnpilot_cont_500_p_scaffold_2954
Phylum: Chloroflexi (71.43%)
14 11796 bp 54.63 4.54 81.71
scnpilot_cont_500_p_scaffold_3718
Domain: Bacteria (85.71%)
7 9837 bp 55.43 4.54 90.88
scnpilot_cont_500_p_scaffold_3719
Phylum: Chloroflexi (50%)
10 9836 bp 53.89 4.54 83.69
scnpilot_cont_500_p_scaffold_996
Domain: Bacteria (80%)
20 27632 bp 58.46 4.55 77.77
scnpilot_cont_500_p_scaffold_2638
Domain: Bacteria (70%)
10 12793 bp 56.08 4.55 87.82
scnpilot_cont_500_p_scaffold_2645
Domain: Bacteria (63.64%)
11 12770 bp 50.56 4.55 73.84
scnpilot_cont_500_p_scaffold_9648
Phylum: Chloroflexi (100%)
4 4388 bp 52.10 4.55 81.15
scnpilot_cont_500_p_scaffold_5200
Domain: Bacteria (100%)
10 10562 bp 55.48 4.56 95.07
scnpilot_cont_500_p_scaffold_3792
Species: Ktedonobacter racemifer (55.56%)
9 9677 bp 59.10 4.56 91.86
Displaying items 401-450 of 660 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.