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08E140C01_z5_2013_Ig3399_v2_scaffold_1614

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(145..1110)
DNA (966bp) protein (322aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase Prs {ECO:0000313|EMBL:AGC68393.1}; EC=2.7.6.1 {ECO:0000313|EMBL:AGC68393.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VS36_CLOSH rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_2
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1268..2653)
DNA (1386bp) protein (462aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Histidinol dehydrogenase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYR5_ANATU rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_3
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(2666..3853)
DNA (1188bp) protein (396aa)
id=1732215 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
id=1732215 Tax=GWC2_Chloroflexi_49_37_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_4
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3850..4122)
DNA (273bp) protein (91aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYQ8_ANATU
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_5
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4127..4462)
DNA (336bp) protein (112aa)
Phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA70_9CHLR
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_6
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(4465..5238)
DNA (774bp) protein (258aa)
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=GWC2_Chloroflexi_49_37_curated
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] rbh
Imidazole glycerol phosphate synthase subunit HisF id=4460011 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_7
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(5238..5978)
DNA (741bp) protein (247aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=GWC2_Chloroflexi_49_37_curated
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase id=4460012 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_8
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(5992..6609)
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=GWC2_Chloroflexi_49_37_curated
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH id=1732224 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_9
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6611..7624)
DNA (1014bp) protein (338aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|RuleBase:RU000599, ECO:0000256|SAAS:SAAS00218099}; EC=4.2.1.19 {ECO:0000256|RuleBase:RU000599, ECO:0000256|SAAS:SAAS00263879};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYR3_ANATU
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_10
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7621..8733)
DNA (1113bp) protein (371aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Histidinol-phosphate aminotransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYR4_ANATU
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8730..9752)
DNA (1023bp) protein (341aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
ATP phosphoribosyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYR6_ANATU
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(10137..11132)
DNA (996bp) protein (332aa)
Aldo/keto reductase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T7C8_MICAI rbh
aldo/keto reductase rbh
Tax=BJP_IG2157_Anaerolineales_55_23
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_13

Not on your lists

comp(11324..12559)
DNA (1236bp) protein (412aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CTW8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89347.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Bcr/CflA family multidrug resistance transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

12826..13941
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7Z5_CALAS
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_15
RLO_PLX_64_10, Bacteria

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13938..14234
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP6_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14528..15322)
DNA (795bp) protein (265aa)
Antibiotic resistance protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0K3_9DELT
valacyclovir hydrolase Tax=CG_Anaero_02
hydrolase
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_17
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15504..15878)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2SRF4_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH97840.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_trna_3
unknown

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comp(16125..16197)
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_18
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16412..17371
DNA (960bp) protein (320aa)
Sulfoxide reductase catalytic subunit YedY id=3743150 bin=GWC2_Chloroflexi_49_37 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative sulfite oxidase subunit YedY; K07147
Tax=BJP_IG2157_Anaerolineales_55_23
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_19
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17373..18029
DNA (657bp) protein (219aa)
Hypothetical membrane protein id=2141202 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
ferric reductase domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_20
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18084..18740
DNA (657bp) protein (219aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Demethylmenaquinone methyltransferase id=2026493 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=BJP_IG2157_Anaerolineales_55_23
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_21

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comp(18791..19399)
DNA (609bp) protein (203aa)
Recombination protein RecR (Fragment) n=1 Tax=uncultured bacterium RepID=K2C9I4_9BACT rbh
Recombination protein RecR {ECO:0000256|SAAS:SAAS00012243}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
recR; recombination protein RecR; K06187 recombination protein RecR
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_22

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comp(19408..19755)
DNA (348bp) protein (116aa)
Nucleoid-associated protein ACD_34C00016G0002 n=1 Tax=uncultured bacterium RepID=K2CUY7_9BACT
Nucleoid-associated protein ACD_34C00016G0002 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K09747 hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_23

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comp(19782..21401)
DNA (1620bp) protein (540aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CUC7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89497.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_24
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(21491..21967)
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=2145764 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_25
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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22031..22510
DNA (480bp) protein (160aa)
hypothetical protein; K06962 Tax=RBG_16_Chloroflexi_57_11_curated
Putative uncharacterized protein id=1699487 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein; K06962
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_trna_2
unknown

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comp(22977..23053)
DNA (77bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_26
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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23139..23657
DNA (519bp) protein (173aa)
Putative uncharacterized protein id=2149546 bin=GWD2_Chloroflexi_49_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=BJP_IG2158_Anaerolineales_38_74
08E140C01_z5_2013_Ig3399_v2_scaffold_1614_27
unknown

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23661..24083
DNA (423bp) protein (141aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1614_trna_1
unknown

Not on your lists

24142..24215
DNA (74bp)
transferRNA
Displaying 30 items

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