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SCNpilot_cont_1000_bf_scaffold_42

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Displaying items 1-30 of 337 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_42_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49..1062)
DNA (1014bp) protein (338aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
Uncharacterized protein {ECO:0000313|EMBL:AEW04398.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEW04398.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002E1A5B6
SCNpilot_cont_1000_bf_scaffold_42_2
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1365..1661
DNA (297bp) protein (99aa)
Putative transcriptional regulator n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G929_CHLAD
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACL26304.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_1000_bf_scaffold_42_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1986..2885)
DNA (900bp) protein (300aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABX06275.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABX06275.1};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B664_HERA2 rbh
monosaccharide-transporting ATPase; K10190 lactose/L-arabinose transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_42_4
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2889..3800)
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XX96_BACIE rbh
binding-protein-dependent transporter inner membrane component; K10189 lactose/L-arabinose transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH97953.1}; TaxID=439292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).;"
SCNpilot_cont_1000_bf_scaffold_42_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3925..5343)
DNA (1419bp) protein (473aa)
Extracellular solute-binding protein family 1 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B666_HERA2 rbh
extracellular solute-binding protein; K10188 lactose/L-arabinose transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABX06277.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_1000_bf_scaffold_42_6
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5543..6577)
DNA (1035bp) protein (345aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L3Y1_NOCAA
periplasmic binding s and sugar binding domain of LacI family protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:AFR06100.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_cont_1000_bf_scaffold_42_7
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7196..8236)
DNA (1041bp) protein (347aa)
Integrase family protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W679_9CYAN rbh
Integrase {ECO:0000313|EMBL:KIJ81563.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
integrase family protein rbh
SCNpilot_cont_1000_bf_scaffold_42_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8478..8975)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J9CDR9_BACCE
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
SCNpilot_cont_1000_bf_scaffold_42_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9111..10070)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSP1_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56229.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_cont_1000_bf_scaffold_42_10
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10220..12853)
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7A5_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX06388.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_1000_bf_scaffold_42_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13714..14466
DNA (753bp) protein (251aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF05_ROSCS
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABU58853.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_1000_bf_scaffold_42_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14463..15656
DNA (1194bp) protein (398aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) rbh
two-component sensor histidine kinase id=24489595 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
SCNpilot_cont_1000_bf_scaffold_42_13
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16044..16811)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5Q1_HERA2
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ABX04284.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_1000_bf_scaffold_42_14
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16828..17166)
DNA (339bp) protein (113aa)
Rhodanese domain protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPI4_MEIRD
Uncharacterized protein {ECO:0000313|EMBL:KER09645.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
rhodanese domain-containing protein
SCNpilot_cont_1000_bf_scaffold_42_15
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(17232..17645)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIP1_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43612.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_1000_bf_scaffold_42_16
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

17991..18374
DNA (384bp) protein (128aa)
Transcriptional regulator, ArsR family id=1870683 bin=GWB2_Proteobacteria_55_19 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Tax=RBG_16_Chloroflexi_54_11_curated
SCNpilot_cont_1000_bf_scaffold_42_17
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(18723..19439)
DNA (717bp) protein (239aa)
LmbE family protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V097_ROSS1 rbh
LmbE family protein rbh
LmbE family protein {ECO:0000313|EMBL:ABQ92300.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_1000_bf_scaffold_42_18
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19603..20001
DNA (399bp) protein (133aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF05_ROSCS
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:AHY46634.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
two component transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_42_19
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

20212..20625
DNA (414bp) protein (138aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase n=2 Tax=Chloroflexus RepID=A9WHD0_CHLAA
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SCNpilot_cont_1000_bf_scaffold_42_20
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20889..21602
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034CC350
hypothetical protein
Alr4513 protein {ECO:0000313|EMBL:BAB76212.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
SCNpilot_cont_1000_bf_scaffold_42_21
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

21728..22684
DNA (957bp) protein (319aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CDV9_KOSOT
4Fe-4S ferredoxin iron-sulfur binding domain protein
Tax=RBG_13_Chloroflexi_48_10_curated
SCNpilot_cont_1000_bf_scaffold_42_22
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22715..23164
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFZ1_9CHLR
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_cont_1000_bf_scaffold_42_23
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

23691..24290
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKC2_DESB2
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
SCNpilot_cont_1000_bf_scaffold_42_24
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24388..24633
DNA (246bp) protein (82aa)
Thiol:disulfide interchange protein DsbD n=1 Tax=Desmospora sp. 8437 RepID=F5SJW6_9BACL
SirA family protein {ECO:0000313|EMBL:KJS34475.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SirA family protein
SCNpilot_cont_1000_bf_scaffold_42_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

24638..26017
DNA (1380bp) protein (460aa)
Beta-lactamase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C608_SPHTD
beta-lactamase domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_1000_bf_scaffold_42_26
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

26339..26752
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVH3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH85376.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_1000_bf_scaffold_42_27
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27362..28573)
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWQ8_RUBXD rbh
Nitrate/nitrite transporter {ECO:0000313|EMBL:AHY45855.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
major facilitator transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter rbh
SCNpilot_cont_1000_bf_scaffold_42_28
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(28860..29192)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI54_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43425.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_1000_bf_scaffold_42_29
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(29189..29722)
DNA (534bp) protein (178aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI55_THET1
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACZ43426.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_1000_bf_scaffold_42_30
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(29719..30342)
DNA (624bp) protein (208aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI56_THET1 rbh
4Fe-4S ferredoxin rbh
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACZ43427.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying items 1-30 of 337 in total

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