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SCNpilot_cont_1000_bf_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 195 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_120_1
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

105..590
DNA (486bp) protein (162aa)
Antioxidant, AhpC/TSA family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WUC8_ANEAE
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:ERI06260.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
haloacid dehalogenase
SCNpilot_cont_1000_bf_scaffold_120_2
unknown

Not on your lists

comp(741..1220)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_120_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(1484..2977)
DNA (1494bp) protein (498aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2N4_THERP rbh
SCNpilot_cont_1000_bf_scaffold_120_4
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3230..4540)
DNA (1311bp) protein (437aa)
RNA polymerase sigma factor SigA n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKT5_MOOTA rbh
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor rbh
Tax=RBG_16_Armatimonadetes_67_12_curated
SCNpilot_cont_1000_bf_scaffold_120_5
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(4875..6896)
DNA (2022bp) protein (674aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4A9_HERA2 rbh
Tax=RBG_13_Chloroflexi_53_26_curated
SCNpilot_cont_1000_bf_scaffold_120_6
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

7509..9026
DNA (1518bp) protein (506aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Glutamate--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Z0_THERP rbh
SCNpilot_cont_1000_bf_scaffold_120_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9266..10363)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4R7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX01683.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_120_8
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..11618
DNA (1107bp) protein (369aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FSI8_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE70105.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_120_9
unknown

Not on your lists

comp(11615..13075)
DNA (1461bp) protein (487aa)
membrane protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B3CF96
SCNpilot_cont_1000_bf_scaffold_120_10
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13524..14135
DNA (612bp) protein (204aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XQ27_PROPF
cytochrome C biogenesis protein transmembrane region
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:AFN46183.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
SCNpilot_cont_1000_bf_scaffold_120_11
unknown

Not on your lists

14506..15690
DNA (1185bp) protein (395aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_120_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

15932..17227
DNA (1296bp) protein (432aa)
Response regulator receiver protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS4_ROSS1 rbh
response regulator receiver protein; K02282 pilus assembly protein CpaE rbh
Response regulator receiver protein {ECO:0000313|EMBL:ABQ89677.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_1000_bf_scaffold_120_13
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17316..18815
DNA (1500bp) protein (500aa)
Type II secretion system protein E n=2 Tax=Chloroflexus RepID=A9WEA0_CHLAA rbh
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
Type II secretion system protein E {ECO:0000313|EMBL:ABY33760.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_1000_bf_scaffold_120_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18843..19751
DNA (909bp) protein (303aa)
Type II secretion system protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C141_SPHTD rbh
type II secretion system protein; K12510 tight adherence protein B rbh
Type II secretion system protein {ECO:0000313|EMBL:ACZ37958.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_1000_bf_scaffold_120_15
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19822..20763
DNA (942bp) protein (314aa)
Type II secretion system protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJV2_ROSCS rbh
type II secretion system protein; K12511 tight adherence protein C rbh
Type II secretion system protein {ECO:0000313|EMBL:ABU57772.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_1000_bf_scaffold_120_16
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20864..21934)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9I0_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI56507.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCNpilot_cont_1000_bf_scaffold_120_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

22081..22455
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C143_SPHTD
hypothetical protein; K09005 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37960.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_1000_bf_scaffold_120_18
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22463..23575)
DNA (1113bp) protein (371aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000313|EMBL:AFY53822.1}; EC=2.7.1.71 {ECO:0000313|EMBL:AFY53822.1};; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
Shikimate kinase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R9Q3_9CYAN
SCNpilot_cont_1000_bf_scaffold_120_19

Not on your lists

comp(23789..25435)
DNA (1647bp) protein (549aa)
family 2 glycosyl transferase; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12] rbh
Conserved hypothetical membrane protein, glycosyl transferase family 2 n=1 Tax=uncultured archaeon RepID=D1JHN4_9ARCH rbh
Conserved hypothetical membrane protein, glycosyl transferase family 2 {ECO:0000313|EMBL:CBH38042.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SCNpilot_cont_1000_bf_scaffold_120_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25461..26177)
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=2105525 bin=GWD2_RBX1-related_39_127 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Tax=GWF2_RBX1_38_17_curated
SCNpilot_cont_1000_bf_scaffold_120_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26394..27554)
DNA (1161bp) protein (387aa)
Two component transcriptional regulator, winged helix family id=3113932 bin=GWF2_OP9-related_38_17 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
fleR; transcriptional activator; K10943 two component system, response regulator FlrC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
SCNpilot_cont_1000_bf_scaffold_120_22

Not on your lists


comp(27753..29507)
DNA (1755bp) protein (585aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
Arginyl-tRNA synthetase n=1 Tax=uncultured prokaryote RepID=H5SLE4_9ZZZZ rbh
Arginyl-tRNA synthetase {ECO:0000313|EMBL:BAL56980.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
SCNpilot_cont_1000_bf_scaffold_120_23
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29619..30413)
DNA (795bp) protein (265aa)
GtrA family protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2J2_CATAD
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ACU69834.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_bf_scaffold_120_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(30479..31327)
DNA (849bp) protein (283aa)
Glycosyl transferase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4F9_SPHTD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACZ39126.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_1000_bf_scaffold_120_25
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31738..32868
DNA (1131bp) protein (377aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Flexithrix dorotheae RepID=UPI000366A42F
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KGE89495.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
SCNpilot_cont_1000_bf_scaffold_120_26
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(32941..33975)
DNA (1035bp) protein (345aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4Q7_9CHLR rbh
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:EFH81487.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
glycosyl hydrolase, family 76 rbh
SCNpilot_cont_1000_bf_scaffold_120_27
unknown

Not on your lists

comp(34334..34558)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_120_28
unknown

Not on your lists

comp(34735..35508)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_120_29
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

35695..37635
DNA (1941bp) protein (647aa)
Peptidase domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URU1_ROSS1
peptidase domain-containing protein
Peptidase domain protein {ECO:0000313|EMBL:ABQ89344.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_1000_bf_scaffold_120_30
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37632..40730)
DNA (3099bp) protein (1033aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NEZ0_9BACL
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:EXU81090.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
Displaying items 1-30 of 195 in total

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