ggKbase home page

SCNpilot_cont_750_bf_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 68 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_290_1
unknown

Not on your lists

3..146
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_2
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

299..2008
DNA (1710bp) protein (570aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBI9_THET1 rbh
DNA mismatch repair protein MutS domain-containing protein rbh
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:ACZ42154.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_750_bf_scaffold_290_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2300..3628
DNA (1329bp) protein (443aa)
glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] rbh
Glucose-1-phosphate adenylyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4V4_SPHTD rbh
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_750_bf_scaffold_290_4
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3688..4911
DNA (1224bp) protein (408aa)
Glycogen synthase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IF59_9CHLR rbh
Glycogen synthase {ECO:0000313|EMBL:EFO80158.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
glycogen synthase rbh
SCNpilot_cont_750_bf_scaffold_290_5
unknown

Not on your lists

comp(5033..5473)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(5755..6330)
DNA (576bp) protein (192aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
SCNpilot_cont_750_bf_scaffold_290_7
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6800..7804
DNA (1005bp) protein (335aa)
phytoene synthase (EC:2.5.1.32)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036C02AA
Phytoene synthase {ECO:0000313|EMBL:KGF71770.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
SCNpilot_cont_750_bf_scaffold_290_8
unknown

Not on your lists

7966..8283
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_9
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8318..8965)
DNA (648bp) protein (216aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase n=2 Tax=Chloroflexus RepID=A9WIV7_CHLAA
Dienelactone hydrolase {ECO:0000313|EMBL:ABY35834.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_750_bf_scaffold_290_10
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9180..9947)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGF3_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42824.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_750_bf_scaffold_290_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10393..12024)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C215_SPHTD rbh
chaperonin GroEL; K04077 chaperonin GroEL rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_750_bf_scaffold_290_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12147..12440)
DNA (294bp) protein (98aa)
groS; chaperonin, 10 kDa; K04078 chaperonin GroES id=14630379 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
Co-chaperonin GroES
Tax=RBG_16_RIF_CHLX_69_14_curated
SCNpilot_cont_750_bf_scaffold_290_13
unknown

Not on your lists

12842..13165
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_14
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

13195..13593
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00035FBE32
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
SCNpilot_cont_750_bf_scaffold_290_15
unknown

Not on your lists

13927..14208
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14306..15193)
DNA (888bp) protein (296aa)
DNA polymerase beta domain protein region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZQ0_9CHLR
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EFH82040.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_750_bf_scaffold_290_17
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

15914..18604
DNA (2691bp) protein (897aa)
ATP-dependent chaperone ClpB n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1X4_DEHLB rbh
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
Tax=RBG_13_Chloroflexi_53_26_curated
SCNpilot_cont_750_bf_scaffold_290_18
unknown

Not on your lists

comp(18748..18978)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_290_19
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

19297..19947
DNA (651bp) protein (217aa)
Phospholipase/Carboxylesterase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXS8_9BACT
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EHO39751.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Putative peptidase
SCNpilot_cont_750_bf_scaffold_290_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19970..20644
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U621_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH80432.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_290_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20669..21469
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035C9165
Uncharacterized protein {ECO:0000313|EMBL:AKF06222.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_290_22
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

21754..22602
DNA (849bp) protein (283aa)
Silent information regulator protein Sir2 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRB3_9BACT
Silent information regulator protein Sir2 {ECO:0000313|EMBL:EHO42394.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
silent information regulator protein Sir2
SCNpilot_cont_750_bf_scaffold_290_23
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22684..23772)
DNA (1089bp) protein (363aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54) rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361, ECO:0000313|EMBL:CEG51947.1};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B7C85 rbh
SCNpilot_cont_750_bf_scaffold_290_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

24330..26951
DNA (2622bp) protein (874aa)
ATPase AAA-2 domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIJ7_ROSCS rbh
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC rbh
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ABU57297.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_750_bf_scaffold_290_25
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27187..28368
DNA (1182bp) protein (394aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UA05_CYAP2
PBS lyase HEAT domain-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ADN16197.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
SCNpilot_cont_750_bf_scaffold_290_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

28731..29948
DNA (1218bp) protein (406aa)
Major Facilitator Superfamily {ECO:0000313|EMBL:AHY47736.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Putative uncharacterized protein id=4194124 bin=GWC2_Methylomirabilis_70_24 species=Streptomyces filamentosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sugar phosphate permease
SCNpilot_cont_750_bf_scaffold_290_27
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

30034..31833
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUV5_HERA2 rbh
hypothetical protein; K14605 lycopene cyclase CruA rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX06543.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_750_bf_scaffold_290_28
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31823..32482)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6VSX0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB99298.1}; TaxID=1208314 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis NBRC 108229.;"
SCNpilot_cont_750_bf_scaffold_290_29
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

32722..34092
DNA (1371bp) protein (457aa)
Molecular chaperone-like protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=B9LHM8_CHLSY rbh
molecular chaperone-like protein; K04046 hypothetical chaperone protein rbh
Molecular chaperone-like protein {ECO:0000313|EMBL:ACL26460.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_750_bf_scaffold_290_30
Dictyostelium fasciculatum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

34396..35826
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3B164_POLPA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGG13381.1}; TaxID=1054147 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium fasciculatum (strain SH3) (Slime mold).;"
Displaying items 1-30 of 68 in total

View Taxonomy