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SCNpilot_cont_750_bf_scaffold_886

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_886_1
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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288..2000
DNA (1713bp) protein (571aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FAV8_9ACTO rbh
ABC transporter {ECO:0000313|EMBL:KDN73479.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
ABC transporter; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_886_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2090..3031
DNA (942bp) protein (314aa)
ABC-transport protein, inner membrane component n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z372_STRSW rbh
ABC transporter; K02033 peptide/nickel transport system permease protein rbh
ABC-transport protein, inner membrane component {ECO:0000313|EMBL:CBG75593.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_cont_750_bf_scaffold_886_3
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3028..4770
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KPB1_9ACTO rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDN73481.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
oligopeptide transporter ( and ATP-binding proteins) rbh
SCNpilot_cont_750_bf_scaffold_886_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4767..5627
DNA (861bp) protein (287aa)
ABC transporter ATP-binding protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RN68_BLASD
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCG02616.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_886_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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5884..7317
DNA (1434bp) protein (478aa)
Beta-lactamase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWJ7_OPITP
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACB73321.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_750_bf_scaffold_886_6
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7552..8442
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI000369ADE9
Beta-lactamase {ECO:0000313|EMBL:KGE16873.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_886_7
unknown

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8417..9016
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036368B5
SCNpilot_cont_750_bf_scaffold_886_8
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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9596..10510
DNA (915bp) protein (305aa)
Transposase IS66 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HKP4_CYAP4
Uncharacterized protein {ECO:0000313|EMBL:KIJ73358.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
transposase IS66
SCNpilot_cont_750_bf_scaffold_886_9
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10700..11407)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HB56_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJY55697.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
SCNpilot_cont_750_bf_scaffold_886_10
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11632..11952)
DNA (321bp) protein (107aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D6Q1_DESAJ
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM41475.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
SCNpilot_cont_750_bf_scaffold_886_11

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12033..12926
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B996_HERA2
Uncharacterized protein {ECO:0000313|EMBL:KKM03205.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_886_12
unknown

Not on your lists

13191..13445
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_886_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13750..17124)
DNA (3375bp) protein (1125aa)
RCC1 repeat-containing protein id=15189933 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
RCC1 repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_886_14
RLO_PLX_64_10, Bacteria

Not on your lists

17549..20101
DNA (2553bp) protein (851aa)
Adenylate/guanylate cyclase id=3293340 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_750_bf_scaffold_886_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20768..21385)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Actinomyces massiliensis RepID=UPI0002F9D501
putative NADH-flavin reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_bf_scaffold_886_16
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21535..22167
DNA (633bp) protein (211aa)
Transcription regulator protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQ21_9SPHN
Transcription regulator protein {ECO:0000313|EMBL:EJU14787.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
transcription regulator protein
SCNpilot_cont_750_bf_scaffold_886_17
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

22169..22336
DNA (168bp) protein (56aa)
Integrase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLW8_9CYAN
integrase
Integrase {ECO:0000313|EMBL:AGY59853.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_750_bf_scaffold_886_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22721..23110
DNA (390bp) protein (130aa)
putative undecaprenol kinase (EC:2.7.1.66); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=UPPP_THERP
Tax=CG_Anaero_02
SCNpilot_cont_750_bf_scaffold_886_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24796..26244
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI00034DE974
multi-sensor signal transduction histidine kinase
SCNpilot_cont_750_bf_scaffold_886_20
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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26744..28513
DNA (1770bp) protein (590aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WN41_9CYAN
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AFZ21835.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
Displaying 20 items

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