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SCNpilot_cont_500_bf_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_450_1
unknown

Not on your lists

comp(431..820)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1108..1875
DNA (768bp) protein (256aa)
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM05_9GAMM
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:AEM46955.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_cont_500_bf_scaffold_450_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1872..2873
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM06_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46956.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_cont_500_bf_scaffold_450_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2833..3396
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM06_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46956.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_cont_500_bf_scaffold_450_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3410..3730)
DNA (321bp) protein (107aa)
Integrase catalytic region n=2 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2J9_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH80928.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_450_6
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3858..4289)
DNA (432bp) protein (144aa)
Tax=BJP_IG2158_Anaerolineales_38_74
SCNpilot_cont_500_bf_scaffold_450_7
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4529..4879)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003611117
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:AIJ26443.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
putative two-component system response regulator
SCNpilot_cont_500_bf_scaffold_450_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

5063..5887
DNA (825bp) protein (275aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TT47_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH83598.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_450_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5937..6380)
DNA (444bp) protein (148aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7W0_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH79971.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transposase
SCNpilot_cont_500_bf_scaffold_450_10
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6406..6813
DNA (408bp) protein (136aa)
Transposase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTJ4_METAC
transposase; K07492 putative transposase
Transposase {ECO:0000313|EMBL:AAM03884.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
SCNpilot_cont_500_bf_scaffold_450_11
unknown

Not on your lists

comp(6683..7201)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_12
unknown

Not on your lists

comp(7793..7915)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_13
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8231..9184
DNA (954bp) protein (318aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKX9_ROSCS
dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
SCNpilot_cont_500_bf_scaffold_450_14
unknown

Not on your lists

9648..9899
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

9923..11038
DNA (1116bp) protein (372aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1E9_9CHLR rbh
Integrase catalytic region {ECO:0000313|EMBL:EFH80800.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_450_16
unknown

Not on your lists

comp(10985..11323)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11630..12823
DNA (1194bp) protein (398aa)
Integrase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6E4_9CHLR
Integrase family protein {ECO:0000313|EMBL:EFH80555.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
site-specific recombinase XerD
SCNpilot_cont_500_bf_scaffold_450_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12975..14102)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI000377FC3C
Uncharacterized protein {ECO:0000313|EMBL:KIF35552.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_450_19
unknown

Not on your lists

comp(14121..14657)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_20
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14720..17128)
DNA (2409bp) protein (803aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF35554.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_450_21
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17125..18144)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZC00_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF35555.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_450_22
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18250..18606)
DNA (357bp) protein (119aa)
Transcriptional regulator, XRE family n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FVS9_DESHD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACL18715.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
SCNpilot_cont_500_bf_scaffold_450_23

Not on your lists

18910..20145
DNA (1236bp) protein (412aa)
IstA transposase IS21 family protein n=1 Tax=uncultured bacterium RM44 RepID=D3W8M3_9BACT rbh
IstA transposase IS21 family protein {ECO:0000313|EMBL:ACX33972.1}; TaxID=672208 species="Bacteria; environmental samples.;" source="uncultured bacterium RM44.;"
integrase
SCNpilot_cont_500_bf_scaffold_450_24

Not on your lists

20142..20879
DNA (738bp) protein (246aa)
IstB ATP binding domain-containing protein n=1 Tax=uncultured bacterium RM44 RepID=D3W8M2_9BACT rbh
IstB ATP binding domain-containing protein {ECO:0000313|EMBL:ACX33971.1}; TaxID=672208 species="Bacteria; environmental samples.;" source="uncultured bacterium RM44.;"
IstB transposition helper protein
SCNpilot_cont_500_bf_scaffold_450_25
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(20873..23101)
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGX2_9CHLR rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF83934.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
transposase number 4 for insertion sequence NGRIS-4g
SCNpilot_cont_500_bf_scaffold_450_26
unknown

Not on your lists

comp(23098..23535)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_27
unknown

Not on your lists

23666..23866
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23882..24412)
DNA (531bp) protein (177aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBE5_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH87929.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_450_29
unknown

Not on your lists

comp(25090..25428)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_450_30
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25687..26601
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EN44_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86107.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Displaying items 1-30 of 77 in total

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