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SCNpilot_cont_500_bf_scaffold_1646_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1646_curated_1
unknown

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96..869
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1646_curated_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1021..2034)
DNA (1014bp) protein (338aa)
rmlB; dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWB4_9BACT
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_500_bf_scaffold_1646_curated_3
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(2127..3209)
DNA (1083bp) protein (361aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidyltransferase n=2 Tax=Chloroflexus RepID=A9WE24_CHLAA
Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_cont_500_bf_scaffold_1646_curated_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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3564..4640
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C696_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37634.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_1646_curated_5
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4744..7452
DNA (2709bp) protein (903aa)
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFT8_9CHLR
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EFO79979.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
SCNpilot_cont_500_bf_scaffold_1646_curated_6
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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7625..9424
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEJ6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO80388.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1646_curated_7
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9428..10183
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B43DFD
Uncharacterized protein {ECO:0000313|EMBL:AKB23511.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SCNpilot_cont_500_bf_scaffold_1646_curated_8
unknown

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10180..10560
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1646_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10779..11201)
DNA (423bp) protein (141aa)
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR4_9BACT
Cytidine deaminase {ECO:0000313|EMBL:EDY16093.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_500_bf_scaffold_1646_curated_10
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(11226..12086)
DNA (861bp) protein (287aa)
Sec-independent protein translocase protein TatC n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCN1_THET1
Sec-independent protein translocase subunit TatC; K03118 sec-independent protein translocase protein TatC
Tax=RBG_13_Chloroflexi_60_13_curated
SCNpilot_cont_500_bf_scaffold_1646_curated_11
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12102..13124)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003734598
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
tatB; Sec-independent protein translocase TatB; K03117 sec-independent protein translocase protein TatB
SCNpilot_cont_500_bf_scaffold_1646_curated_12
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13415..13897)
DNA (483bp) protein (161aa)
transcription elongation factor GreA n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A09130
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannaschiana VP2.;"
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
SCNpilot_cont_500_bf_scaffold_1646_curated_13
unknown

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14316..14882
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1646_curated_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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14918..15781
DNA (864bp) protein (288aa)
Amidohydrolase 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF74_9CHLR
Amidohydrolase 2 {ECO:0000313|EMBL:EFH90474.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
amidohydrolase 2; K07045
SCNpilot_cont_500_bf_scaffold_1646_curated_15
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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15778..16398
DNA (621bp) protein (207aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RUVA_HERA2
SCNpilot_cont_500_bf_scaffold_1646_curated_16
Saprolegnia diclina, Saprolegnia, Saprolegniales, Eukaryota

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16728..18536
DNA (1809bp) protein (603aa)
PREDICTED: mucin-2-like, partial n=1 Tax=Bos taurus RepID=UPI000383F811
Uncharacterized protein {ECO:0000313|EMBL:EQC27592.1}; TaxID=1156394 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia.;" source="Saprolegnia diclina VS20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1646_curated_17
unknown

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comp(18550..18753)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 17 items

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