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SCNpilot_cont_500_bf_scaffold_358_curated

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_358_curated_1
unknown

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_2
unknown

Not on your lists

comp(314..1885)
DNA (1572bp) protein (524aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_3
unknown

Not on your lists

comp(1974..2300)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_4
unknown

Not on your lists

2457..2906
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_5
unknown

Not on your lists

2893..3378
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_6
unknown

Not on your lists

3384..4580
DNA (1197bp) protein (399aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_7
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4567..5418
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU64_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20738.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_358_curated_8
unknown

Not on your lists

comp(5556..5807)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5890..6714)
DNA (825bp) protein (275aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLH4_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH86624.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
integrase
SCNpilot_cont_500_bf_scaffold_358_curated_10
unknown

Not on your lists

7165..7566
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7835..9901
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W6W3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44943.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_358_curated_12
unknown

Not on your lists

comp(10059..10484)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_13
unknown

Not on your lists

11156..11266
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_14
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11317..12495
DNA (1179bp) protein (393aa)
WD40 domain-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHR0_9CHLR
WD40 domain-containing protein {ECO:0000313|EMBL:EFO79280.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
WD40 domain-containing protein beta Propeller
SCNpilot_cont_500_bf_scaffold_358_curated_15
unknown

Not on your lists

12492..12770
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_16
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13615..13965
DNA (351bp) protein (117aa)
ABC-2 type transporter n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7T3_CHLAD
ABC-2 type transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_500_bf_scaffold_358_curated_17
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

14049..14309
DNA (261bp) protein (87aa)
Daunorubicin resistance ABC transporter, inner membrane subunit B n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C427_THENR
daunorubicin resistance ABC transporter, inner membrane subunit B; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 /; RKU-10).;"
SCNpilot_cont_500_bf_scaffold_358_curated_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14796..15362
DNA (567bp) protein (189aa)
Methyltransferase type 11 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAP2_CONWI
methyltransferase type 11
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_500_bf_scaffold_358_curated_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(15810..16976)
DNA (1167bp) protein (389aa)
Transposase, IS605 OrfB family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVZ7_9CHLR
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EFH84380.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transposase, IS605 OrfB family
SCNpilot_cont_500_bf_scaffold_358_curated_20
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17516..18442)
DNA (927bp) protein (309aa)
Methyltransferase type 11 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CJU5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIF17769.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
type 12 methyltransferase
SCNpilot_cont_500_bf_scaffold_358_curated_21
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18461..19285)
DNA (825bp) protein (275aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SB98_INTC7
cytochrome C biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
SCNpilot_cont_500_bf_scaffold_358_curated_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(19360..20454)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6A3_SPHTD
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_500_bf_scaffold_358_curated_23

Not on your lists

comp(20447..22345)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG8C21 RepID=B3TA21_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ09430.1}; TaxID=455553 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8C21.;"
SCNpilot_cont_500_bf_scaffold_358_curated_24
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(22332..22979)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY03_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM04961.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_cont_500_bf_scaffold_358_curated_25
unknown

Not on your lists

comp(22992..23651)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_358_curated_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23651..24661)
DNA (1011bp) protein (337aa)
cycL; cytochrome c-type biogenesis protein cycL id=14431032 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_500_bf_scaffold_358_curated_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24658..26685)
DNA (2028bp) protein (676aa)
Cytochrome c assembly protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3N3_SPHTD
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c assembly protein {ECO:0000313|EMBL:ACZ38850.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_358_curated_28
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(26879..27442)
DNA (564bp) protein (188aa)
Redoxin domain-containing protein id=14426775 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
alkyl hydroperoxide reductase; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
Tax=RBG_16_Chloroflexi_64_32_curated
SCNpilot_cont_500_bf_scaffold_358_curated_29
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(27791..29536)
DNA (1746bp) protein (582aa)
Peptidase M23 family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2M1_CALAS
peptidase M23 family protein
Peptidase M23 family protein {ECO:0000313|EMBL:BAL99508.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_500_bf_scaffold_358_curated_30
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30533..31240
DNA (708bp) protein (236aa)
High-affinity nickel transporter n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4Z4_9BURK
Nickel transporter {ECO:0000313|EMBL:KDP86887.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
high-affinity nickel transporter; K07241 high-affinity nickel-transport protein
Displaying items 1-30 of 65 in total

View Taxonomy