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SCNpilot_cont_500_bf_scaffold_883_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_883_curated_1
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(221..1159)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FP61_DEHSB
LtrC-like protein {ECO:0000313|EMBL:AII57412.1}; TaxID=1432059 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_883_curated_2
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(1697..2185)
DNA (489bp) protein (163aa)
HNH endonuclease n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITM5_9CHRO
HNH endonuclease domain-containing protein
Tax=CG_CPR09_01
SCNpilot_cont_500_bf_scaffold_883_curated_3
unknown

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comp(2252..5641)
DNA (3390bp) protein (1130aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_4
unknown

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comp(5752..5856)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_5
unknown

Not on your lists

comp(5938..7500)
DNA (1563bp) protein (521aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_6
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(7761..8747)
DNA (987bp) protein (329aa)
HNH endonuclease family protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A7T9_PELCD
Putative restriction endonuclease {ECO:0000313|EMBL:AHY45647.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
restriction endonuclease; K07454 putative restriction endonuclease
SCNpilot_cont_500_bf_scaffold_883_curated_7
unknown

Not on your lists

comp(8998..10026)
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_8
unknown

Not on your lists

comp(10382..11248)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_9
unknown

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comp(11298..12095)
DNA (798bp) protein (266aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_10
unknown

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comp(12098..12832)
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_11
unknown

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comp(12956..13300)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13308..17138)
DNA (3831bp) protein (1277aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8V5_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40248.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_883_curated_13

Not on your lists

17944..19077
DNA (1134bp) protein (378aa)
Transcriptional regulator, XRE family n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUY3_KYRT2
Marine sediment metagenome DNA, contig: S12H4_S09963 {ECO:0000313|EMBL:GAI90870.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_883_curated_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19078..21018)
DNA (1941bp) protein (647aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. SS RepID=A7BLR9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD03970.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein; K09744 hypothetical protein
SCNpilot_cont_500_bf_scaffold_883_curated_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21046..22944)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003806799
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:CDM66468.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rad25; DNA repair protein
SCNpilot_cont_500_bf_scaffold_883_curated_16
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23039..25222)
DNA (2184bp) protein (728aa)
hybrid histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029B500E
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EMI21228.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hybrid histidine kinase
SCNpilot_cont_500_bf_scaffold_883_curated_17
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

Not on your lists

25786..29145
DNA (3360bp) protein (1120aa)
Putative DNA/RNA helicase (SNF2 family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W926_UNCMA rbh
Tax=RBG_13_Lokiarchaeota_45_8_curated
SCNpilot_cont_500_bf_scaffold_883_curated_18

Not on your lists

29172..30095
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos34A6 RepID=Q649V2_9ARCH rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83825.1}; TaxID=285405 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos34A6.;"
zinc finger, swim domain-containing protein
SCNpilot_cont_500_bf_scaffold_883_curated_19
unknown

Not on your lists

30298..30657
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_20
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

30725..34189
DNA (3465bp) protein (1155aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1X8_ISOPI
hypothetical protein
Tax=CG_Arma_01
SCNpilot_cont_500_bf_scaffold_883_curated_21
unknown

Not on your lists

34461..34631
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_22
unknown

Not on your lists

comp(34981..35442)
DNA (462bp) protein (154aa)
Heat shock protein DnaJ domain protein id=4016538 bin=GWF2_Bacteroidetes_35_48 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
SCNpilot_cont_500_bf_scaffold_883_curated_23
unknown

Not on your lists

35731..36480
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_24

Not on your lists

comp(36896..37162)
DNA (267bp) protein (89aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZM38_9ZZZZ
Dihydrodipicolinate reductase {ECO:0000313|EMBL:EQD49406.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_cont_500_bf_scaffold_883_curated_25
bacterium YEK0313, Bacteria

Not on your lists

comp(37370..37699)
DNA (330bp) protein (110aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
Dihydrodipicolinate reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT38_9RHIZ
SCNpilot_cont_500_bf_scaffold_883_curated_26
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(37735..38220)
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMX2_CHIPD
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
SCNpilot_cont_500_bf_scaffold_883_curated_27
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(38418..39530)
DNA (1113bp) protein (371aa)
PAS domain S-box n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KT44_9SYNC
multi-sensor signal transduction histidine kinase
Tax=CG_Anaero_02
SCNpilot_cont_500_bf_scaffold_883_curated_28
unknown

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comp(39841..40830)
DNA (990bp) protein (330aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_883_curated_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(40853..41362)
DNA (510bp) protein (170aa)
ferritin Dps family protein; K03594 bacterioferritin id=14425674 bin=bin1_lowGC species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
ferritin Dps family protein; K03594 bacterioferritin
Tax=CSP1_2_Dadabacteria
SCNpilot_cont_500_bf_scaffold_883_curated_30
unknown

Not on your lists

comp(41394..41819)
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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