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B_1_S1_Biohub_coassembly_k141_132227

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_132227_1
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(581..2200)
DNA (1620bp) protein (540aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS12641.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
B_1_S1_Biohub_coassembly_k141_132227_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2215..7281)
DNA (5067bp) protein (1689aa)
Putative ATPase {ECO:0000313|EMBL:KCZ71707.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
B_1_S1_Biohub_coassembly_k141_132227_3
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(7720..7890)
DNA (171bp) protein (57aa)
Transposase, orfA, IS3/IS911-family {ECO:0000313|EMBL:AGG07289.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi BTF08.;"
B_1_S1_Biohub_coassembly_k141_132227_4
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(8216..8626)
DNA (411bp) protein (137aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_132227_5
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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8780..9142
DNA (363bp) protein (121aa)
Tax=CG_Delta_05
B_1_S1_Biohub_coassembly_k141_132227_6

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9183..11090
DNA (1908bp) protein (636aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO00689.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_132227_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11232..11558
DNA (327bp) protein (109aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
B_1_S1_Biohub_coassembly_k141_132227_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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11584..12495
DNA (912bp) protein (304aa)
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_132227_9

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12516..12980
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK51271.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_132227_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13194..13658
DNA (465bp) protein (155aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_132227_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

13683..14450
DNA (768bp) protein (256aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_132227_12
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

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comp(14669..15049)
DNA (381bp) protein (127aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADJ25710.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
B_1_S1_Biohub_coassembly_k141_132227_13

Not on your lists

comp(15092..15481)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL56333.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_132227_14
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(15526..15900)
DNA (375bp) protein (125aa)
Tax=CG_Anaero_02
B_1_S1_Biohub_coassembly_k141_132227_15
unknown

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comp(16389..16565)
DNA (177bp) protein (59aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_132227_trna_1
unknown

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16936..17009
DNA (74bp)
transferRNA Arg
B_1_S1_Biohub_coassembly_k141_132227_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17163..19073)
DNA (1911bp) protein (637aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_132227_17
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19374..20588)
DNA (1215bp) protein (405aa)
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_132227_18
unknown

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21037..21114
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 19 items

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