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B_1_S1_Biohub_coassembly_k141_1349243

Search features with annotation key words

Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1349243_16S_1
unknown

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comp(1..928)
DNA (928bp)
16S ribosomal RNA (16S rRNA)
B_1_S1_Biohub_coassembly_k141_1349243_1
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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1397..2044
DNA (648bp) protein (216aa)
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
50S ribosomal protein L25
Tax=RBG_13_Chloroflexi_60_13_curated
B_1_S1_Biohub_coassembly_k141_1349243_2
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2073..3002)
DNA (930bp) protein (310aa)
pth:PTH_1417 trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
trxB2; thioredoxin-disulfide reductase (EC:1.8.1.9)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_3

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comp(2999..3346)
DNA (348bp) protein (116aa)
Marine sediment metagenome DNA, contig: S12H4_S13094 {ECO:0000313|EMBL:GAJ15792.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1349243_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3330..3656)
DNA (327bp) protein (109aa)
LBCA THIOREDOXIN Tax=synthetic construct RepID=UPI00038A5F74
thioredoxin
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_5
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(3631..4644)
DNA (1014bp) protein (338aa)
Phosphate acyltransferase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K018_DEHLB
fatty acid/phospholipid synthesis protein PlsX
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_1349243_6
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(4665..5639)
DNA (975bp) protein (325aa)
CoA-substrate-specific enzyme activase, putative Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDV7_9FIRM
CoA-substrate-specific enzyme activase, putative
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1349243_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5681..6766)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein Tax=Thermincola potens (strain JR) RepID=D5X7C7_THEPJ
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_8

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comp(6771..7748)
DNA (978bp) protein (326aa)
Putative uncharacterized protein Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VYZ3_DESAS
Marine sediment metagenome DNA, contig: S06H3_L03385 {ECO:0000313|EMBL:GAI12572.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1349243_9
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

8092..8385
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1L8_DEHLB
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_1349243_10
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

8480..11059
DNA (2580bp) protein (860aa)
Heavy metal translocating P-type ATPase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1M0_DEHLB
heavy metal translocating P-type ATPase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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11072..11278
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LJX5_THEPS
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_12
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

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11479..11628
DNA (150bp) protein (50aa)
YHS domain-containing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
YHS domain-containing protein
Tax=RBG_13_Chloroflexi_52_12_curated
B_1_S1_Biohub_coassembly_k141_1349243_13
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(11693..11938)
DNA (246bp) protein (82aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363B5ED
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_1349243_14

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comp(11952..12869)
DNA (918bp) protein (306aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Alkyl hydroperoxide reductase subunit F Tax=uncultured Desulfobacterium sp. RepID=E1YD82_9DELT
Marine sediment metagenome DNA, contig: S03H2_L00409 {ECO:0000313|EMBL:GAH36883.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1349243_15
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

13577..14440
DNA (864bp) protein (288aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1349243_16
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

14459..15649
DNA (1191bp) protein (397aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.1)
LL-diaminopimelate aminotransferase Tax=Dehalococcoides ethenogenes (strain 195) RepID=DAPAT_DEHE1
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1349243_17
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

15704..16858
DNA (1155bp) protein (385aa)
GTPase HflX Tax=Dehalococcoides mccartyi BTF08 RepID=M1QSQ2_9CHLR
GTP-binding protein HflX
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1349243_18
unknown

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comp(16954..17166)
DNA (213bp) protein (71aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1349243_19
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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17482..18963
DNA (1482bp) protein (494aa)
Alpha amylase, catalytic region bin=GWA2_OP3_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
alpha amylase
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_1349243_20
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18990..19562)
DNA (573bp) protein (191aa)
D,D-heptose 1,7-bisphosphate phosphatase bin=GWD2_Nitrospirae-related_57_8 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
gmhB; D-glycero-D-mannoheptose-1,7-bisphosphate phosphatase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_21
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(19569..20171)
DNA (603bp) protein (201aa)
Phosphoheptose isomerase Tax=Geobacter sp. (strain M21) RepID=GMHA_GEOSM
phosphoheptose isomerase
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_trna_1
unknown

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20307..20380
DNA (74bp)
transferRNA Glu
B_1_S1_Biohub_coassembly_k141_1349243_22
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(20450..21316)
DNA (867bp) protein (289aa)
Site-specific recombinase, phage integrase family Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z6H5_DEHE1
phage integrase site specific recombinase
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_1349243_23

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comp(21301..21600)
DNA (300bp) protein (100aa)
Phage integrase family protein Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FQU2_DEHSB
Marine sediment metagenome DNA, contig: S12H4_S12988 {ECO:0000313|EMBL:GAJ15221.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage integrase family protein
B_1_S1_Biohub_coassembly_k141_1349243_24
unknown

Not on your lists

comp(21597..22259)
DNA (663bp) protein (221aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1349243_25
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

22367..22552
DNA (186bp) protein (62aa)
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_1349243_26
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

22564..22764
DNA (201bp) protein (67aa)
hypothetical protein Tax=Xanthobacteraceae RepID=UPI0003655C0C
DNA binding protein, excisionase family
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_1349243_27

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22757..25108
DNA (2352bp) protein (784aa)
Phage/plasmid primase, P4 family Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3A1_9BACI bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_C01568 {ECO:0000313|EMBL:GAI61178.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Phage/plasmid primase, P4 family
B_1_S1_Biohub_coassembly_k141_1349243_28
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

25098..25463
DNA (366bp) protein (122aa)
Tax=CG_Caldi_01
Displaying items 1-30 of 222 in total

View Taxonomy