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B_1_S1_Biohub_coassembly_k141_1976669

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1976669_1
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(4..459)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037A40C1
Acetyltransferase
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_2
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(610..891)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4X3_GEODF
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_3
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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1078..1284
DNA (207bp) protein (69aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1330..2385
DNA (1056bp) protein (352aa)
tRNA-specific 2-thiouridylase MnmA bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_1976669_5
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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2390..2842
DNA (453bp) protein (151aa)
MOSC domain containing protein Tax=Methanobacterium sp. AL-21 RepID=F0T6Y6_METSL bin=RBG2 species=Methanobacterium sp. AL-21 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RBG2 organism_group=Chloroflexi
MOSC domain-containing protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_6
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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2826..3614
DNA (789bp) protein (263aa)
Protein FdhD homolog bin=GWC2_Syntrophus__56_31 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
formate dehydrogenase family accessory protein FdhD
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_1976669_7
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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3607..4521
DNA (915bp) protein (305aa)
dly:Dehly_0133 quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
quinolinate synthetase complex subunit A
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_8
unknown

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comp(4550..5053)
DNA (504bp) protein (168aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1976669_9
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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5717..6898
DNA (1182bp) protein (394aa)
Carboxyl-terminal protease Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9I9_DEHE1
peptidase S41
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_10

Not on your lists

6990..7814
DNA (825bp) protein (275aa)
Signal peptide peptidase SppA Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I163_CALAS
Marine sediment metagenome DNA, contig: S03H2_S09756 {ECO:0000313|EMBL:GAH74909.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sppA; signal peptide peptidase SppA
B_1_S1_Biohub_coassembly_k141_1976669_11

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7811..8767
DNA (957bp) protein (319aa)
Marine sediment metagenome DNA, contig: S06H3_L03580 {ECO:0000313|EMBL:GAI14922.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1976669_12
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

8898..9569
DNA (672bp) protein (224aa)
hypothetical protein
Putative uncharacterized protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_1976669_13
Vibrio coralliilyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9678..10718
DNA (1041bp) protein (347aa)
hypothetical protein Tax=Vibrio coralliilyticus RepID=UPI0002DABA77
Uncharacterized protein {ECO:0000313|EMBL:ERB65743.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio coralliilyticus OCN008.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1976669_14
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10768..11052
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
B_1_S1_Biohub_coassembly_k141_1976669_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(11049..11558)
DNA (510bp) protein (170aa)
def; peptide deformylase (EC:3.5.1.88)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036AB137
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_1976669_16
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(11780..14218)
DNA (2439bp) protein (813aa)
dev:DhcVS_278 primosomal protein N, (replication factor Y) (superfamily II helicase); K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
priA; primosomal protein N
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_1976669_17

Not on your lists


comp(14245..14658)
DNA (414bp) protein (138aa)
Marine sediment metagenome DNA, contig: S12H4_C03935 {ECO:0000313|EMBL:GAI59092.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
50S ribosomal protein L19
B_1_S1_Biohub_coassembly_k141_1976669_18

Not on your lists

comp(14683..15417)
DNA (735bp) protein (245aa)
det:DET0339 trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine-N1-)-methyltransferase [EC:2.1.1.31] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
Marine sediment metagenome DNA, contig: S12H4_L03409 {ECO:0000313|EMBL:GAI79869.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1976669_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(15452..16396)
DNA (945bp) protein (315aa)
Putative methyltransferase Tax=Prochloron didemni P3-Solomon RepID=G0XS85_PRODI bin=RBG2 species=Prochloron didemni genus=Prochloron taxon_order=Prochlorales taxon_class=unknown phylum=Cyanobacteria tax=RBG2 organism_group=Chloroflexi
type 11 methyltransferase
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_1976669_20

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comp(16344..16910)
DNA (567bp) protein (189aa)
Glycerol-3-phosphate acyltransferase Tax=Dehalococcoides sp. (strain VS) RepID=D2BJ33_DEHSV
Marine sediment metagenome DNA, contig: S06H3_S20952 {ECO:0000313|EMBL:GAI57352.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1976669_trna_5
unknown

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comp(16929..17009)
DNA (81bp)
transferRNA Leu
B_1_S1_Biohub_coassembly_k141_1976669_trna_4
unknown

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comp(17022..17094)
DNA (73bp)
transferRNA Cys
B_1_S1_Biohub_coassembly_k141_1976669_21
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(17375..17980)
DNA (606bp) protein (202aa)
membrane transporter, MarC family; K05595 multiple antibiotic resistance protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
multiple antibiotic resistance (MarC)-like protein
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
B_1_S1_Biohub_coassembly_k141_1976669_22
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

18106..19401
DNA (1296bp) protein (432aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJJ5_DESK7
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_1976669_23
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

19446..21827
DNA (2382bp) protein (794aa)
mev:Metev_1257 oligosaccharyl transferase subunit STT3; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligosaccharyl transferase STT3 subunit
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_1976669_24

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21896..22696
DNA (801bp) protein (267aa)
lsrF; putative aldolase LsrF (EC:4.1.2.-)
Similar to fructose-1,6-biphosphate aldolase class I Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2R8_9BACT bin=RBG2 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S12H4_L00218 {ECO:0000313|EMBL:GAI87036.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_1976669_25
unknown

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22689..23213
DNA (525bp) protein (175aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1976669_26
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23297..23878
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZUY2_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW68072.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
B_1_S1_Biohub_coassembly_k141_1976669_27

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23954..24982
DNA (1029bp) protein (343aa)
Marine sediment metagenome DNA, contig: S01H1_L00268 {ECO:0000313|EMBL:GAF80998.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
opr:Ocepr_0364 alcohol dehydrogenase GroES domain protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
theronine dehydrogenase-like Zn-dependent dehydrogenase
B_1_S1_Biohub_coassembly_k141_1976669_28
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(25112..26281)
DNA (1170bp) protein (390aa)
ttr:Tter_2663 chromate transporter, chromate ion transporter (CHR) family; K07240 chromate transporter bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
chromate transporter chromate ion transporter (CHR) family
Tax=RBG_16_Chloroflexi_51_9_curated
Displaying items 1-30 of 128 in total

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