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B_1_S1_Biohub_coassembly_k141_3038162

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Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3038162_1
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..560)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Clostridium sp. CAG:242 RepID=R6D286_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79204.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3038162_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(545..1396)
DNA (852bp) protein (284aa)
Site-specific DNA methylase (EC:2.1.1.72)
Site-specific DNA methylase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA16_METCZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
B_1_S1_Biohub_coassembly_k141_3038162_3

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comp(1535..1894)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Thermofilum sp. 1910b RepID=S5ZBR9_9CREN
Marine sediment metagenome DNA, contig: S01H4_S08192 {ECO:0000313|EMBL:GAG91475.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3038162_4
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(2002..3696)
DNA (1695bp) protein (565aa)
GMP synthase [glutamine-hydrolyzing] Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K041_DEHLB
GMP synthase
Tax=RBG_13_Chloroflexi_51_18_curated
B_1_S1_Biohub_coassembly_k141_3038162_5
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

3858..4499
DNA (642bp) protein (214aa)
Sua5 superfamily-related protein Tax=Pyrococcus yayanosii CH1 RepID=F8AEG8_PYRYC bin=RBG2 species=Pyrococcus yayanosii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG2 organism_group=Chloroflexi
Sua5/YciO/YrdC/YwlC family protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_6

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4589..5056
DNA (468bp) protein (156aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B Tax=Clostridium butyricum RepID=B1R2I2_CLOBU bin=RBG2 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S01H4_L04608 {ECO:0000313|EMBL:GAG88220.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_3038162_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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5225..6904
DNA (1680bp) protein (560aa)
dev:DhcVS_738 ilvD; dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_3038162_8
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

6901..8625
DNA (1725bp) protein (575aa)
Acetolactate synthase Tax=Dehalococcoides sp. (strain VS) RepID=D2BHR9_DEHSV
ilvB; acetolactate synthase, large subunit, biosynthetic type
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3038162_9
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

8783..9319
DNA (537bp) protein (179aa)
Acetolactate synthase, small subunit Tax=Dehalococcoides mccartyi RepID=A5FR45_DEHSB
acetolactate synthase small subunit
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_3038162_10
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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9413..10366
DNA (954bp) protein (318aa)
UspA domain-containing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
UspA domain-containing protein
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_3038162_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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10529..11521
DNA (993bp) protein (331aa)
det:DET0831 ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

12046..13566
DNA (1521bp) protein (507aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Dehalococcoides mccartyi GY50 RepID=V5QDD3_9CHLR
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_13
unknown

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13719..13889
DNA (171bp) protein (57aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3038162_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

14135..15385
DNA (1251bp) protein (417aa)
leuC; 3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase, large subunit Tax=Dehalococcoides mccartyi GY50 RepID=V5QBA9_9CHLR
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

15574..15804
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TA29_9EURY
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3038162_16

Not on your lists

15808..16056
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TA29_9EURY
Marine sediment metagenome DNA, contig: S06H3_S07310 {ECO:0000313|EMBL:GAI28127.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3038162_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

16079..16825
DNA (747bp) protein (249aa)
hypothetical protein Tax=unclassified candidate division OP9 RepID=UPI0003658B7D
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
B_1_S1_Biohub_coassembly_k141_3038162_18
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

17015..17515
DNA (501bp) protein (167aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z895_DEHE1
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3038162_trna_5
unknown

Not on your lists

comp(17710..17781)
DNA (72bp)
transferRNA Gly
B_1_S1_Biohub_coassembly_k141_3038162_trna_4
unknown

Not on your lists

comp(17838..17910)
DNA (73bp)
transferRNA Phe
B_1_S1_Biohub_coassembly_k141_3038162_19
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

18115..18444
DNA (330bp) protein (110aa)
UPF0296 protein DehaBAV1_0033 Tax=Dehalococcoides mccartyi RepID=Y033_DEHSB
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_20
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

18425..19063
DNA (639bp) protein (213aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Dehalococcoides ethenogenes (strain 195) RepID=KGUA_DEHE1
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_21

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19307..19936
DNA (630bp) protein (210aa)
Putative uncharacterized protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3ZAG1_DEHE1
Marine sediment metagenome DNA, contig: S06H3_S22164 {ECO:0000313|EMBL:GAI56369.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphate transport regulator
B_1_S1_Biohub_coassembly_k141_3038162_22
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

20002..21006
DNA (1005bp) protein (335aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family bin=bin3_NC10 species=Hyphomicrobium zavarzinii genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
phosphate transporter
Tax=RBG_13_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3038162_23
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(21253..22266)
DNA (1014bp) protein (338aa)
tro:trd_0778 gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_24
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22338..23636)
DNA (1299bp) protein (433aa)
eno; enolase (EC:4.2.1.11)
Enolase Tax=Dehalococcoides mccartyi BTF08 RepID=M1RDH1_9CHLR
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3038162_25

Not on your lists

comp(23831..25147)
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380325D
Uncharacterized protein {ECO:0000313|EMBL:KKN34198.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
adenine specific DNA methylase Mod
B_1_S1_Biohub_coassembly_k141_3038162_26
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

25423..25752
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9J9_DEHE1
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3038162_27
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

25887..27293
DNA (1407bp) protein (469aa)
Phage domain protein Tax=Dehalococcoides sp. (strain VS) RepID=D2BGK4_DEHSV
portal protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3038162_28

Not on your lists

27290..27790
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi DCMB5 RepID=M1QUK0_9CHLR
Marine sediment metagenome DNA, contig: S12H4_S02732 {ECO:0000313|EMBL:GAI99084.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 225 in total

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