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B_1_S1_Biohub_coassembly_k141_3995045

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3995045_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3995045_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

481..855
DNA (375bp) protein (125aa)
Sodium/hydrogen exchanger Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5U4_METSW
sodium/hydrogen exchanger
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_3
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(1155..1862)
DNA (708bp) protein (236aa)
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3995045_4
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(2053..3156)
DNA (1104bp) protein (368aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVS4_9AQUI
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3995045_5

Not on your lists

comp(3191..3706)
DNA (516bp) protein (172aa)
Marine sediment metagenome DNA, contig: S06H3_S16154 {ECO:0000313|EMBL:GAI44029.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_3995045_6
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3672..4724)
DNA (1053bp) protein (351aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZYY1_DEHSC
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3995045_7
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(4732..4926)
DNA (195bp) protein (65aa)
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_8
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(4958..6151)
DNA (1194bp) protein (398aa)
Aminotransferase class I and II Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K150_DEHLB
class I and II aminotransferase
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3995045_9

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comp(6219..6701)
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family Tax=Dehalococcoides sp. (strain VS) RepID=D2BIT7_DEHSV
Marine sediment metagenome DNA, contig: S12H4_C00666 {ECO:0000313|EMBL:GAI67537.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
B_1_S1_Biohub_coassembly_k141_3995045_10
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6762..7931)
DNA (1170bp) protein (390aa)
Sodium/hydrogen exchanger Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5U4_METSW
sodium/hydrogen exchanger
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_11
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8163..8363)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8U8_DEHE1
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_12
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(8457..10310)
DNA (1854bp) protein (618aa)
GTP-binding protein TypA Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0D7_DEHLB
GTP-binding protein TypA
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3995045_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10645..11121)
DNA (477bp) protein (159aa)
HNH endonuclease domain protein Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XUG8_9CORY
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3995045_14
unknown

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comp(11348..11614)
DNA (267bp) protein (89aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3995045_15
unknown

Not on your lists

11775..11894
DNA (120bp) protein (40aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3995045_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

11944..12489
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Natronorubrum tibetense GA33 RepID=L9VST8_9EURY
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
B_1_S1_Biohub_coassembly_k141_3995045_17
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12853..13338)
DNA (486bp) protein (162aa)
UspA domain protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
universal stress protein uspa-like protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3995045_18
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists


13664..15481
DNA (1818bp) protein (606aa)
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartyl-tRNA synthetase Tax=Dehalococcoides mccartyi GY50 RepID=V5QBV3_9CHLR
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_3995045_19
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

15478..16791
DNA (1314bp) protein (438aa)
Trigger factor Tax=Dehalococcoides sp. (strain VS) RepID=D2BHG2_DEHSV
tig1; trigger factor
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_20
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

16788..17402
DNA (615bp) protein (205aa)
det:DET0710 clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
clpP; ATP-dependent Clp protease, proteolytic subunit (EC:3.4.21.92)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_21

Not on your lists

comp(17409..18383)
DNA (975bp) protein (325aa)
Sugar kinase ribokinase Tax=Dehalococcoides mccartyi RepID=D2BHG4_DEHSV
Marine sediment metagenome DNA, contig: S01H1_L00733 {ECO:0000313|EMBL:GAF69297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribokinase
B_1_S1_Biohub_coassembly_k141_3995045_22
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18393..19319)
DNA (927bp) protein (309aa)
Putative uncharacterized protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCR1_AMMDK
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_23

Not on your lists

comp(19398..19934)
DNA (537bp) protein (179aa)
Formyl transferase domain protein Tax=Dehalococcoides mccartyi RepID=D3SIG9_DEHSG
Marine sediment metagenome DNA, contig: S03H2_S21646 {ECO:0000313|EMBL:GAH80692.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
formyl transferase
B_1_S1_Biohub_coassembly_k141_3995045_24
unknown

Not on your lists

20049..20228
DNA (180bp) protein (60aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3995045_25
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(20285..20929)
DNA (645bp) protein (215aa)
PHP domain protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8J5_DEHE1
phosphotransferase domain-containing protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_26
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(20954..22039)
DNA (1086bp) protein (362aa)
metallopeptidase, M24 family (EC:3.4.11.9)
det:DET0715 M24 family metallopeptidase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_27
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22036..23013)
DNA (978bp) protein (326aa)
Tyrosine recombinase XerC Tax=Dehalococcoides sp. (strain VS) RepID=D2BHG9_DEHSV
xerD3; site-specific recombinase
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_3995045_28
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23018..25123)
DNA (2106bp) protein (702aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I Tax=Dehalococcoides mccartyi GY50 RepID=V5QCX0_9CHLR
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_3995045_29
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(25291..26418)
DNA (1128bp) protein (376aa)
dev:DhcVS_625 Rossmann fold DNA uptake nucleotide-binding protein; K04096 DNA processing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Rossmann fold DNA uptake nucleotide-binding protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3995045_30
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(26496..26873)
DNA (378bp) protein (126aa)
id=2096416 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=BJP_IG2158_Zixibacteria_48_33
Displaying items 1-30 of 36 in total

View Taxonomy