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B_1_S1_Biohub_coassembly_k141_4452442

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4452442_1
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
Methionine synthase B12-binding module cap domain protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLN0_DESK7
Cobalamin-binding protein {ECO:0000313|EMBL:KJS10342.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
methionine synthase B12-binding module cap domain-containing protein
B_1_S1_Biohub_coassembly_k141_4452442_2
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

887..1990
DNA (1104bp) protein (368aa)
Putative thermolysin family peptidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0T6_ANATU
putative thermolysin family peptidase
Tax=CG_Anaero_02
B_1_S1_Biohub_coassembly_k141_4452442_3
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

2029..2289
DNA (261bp) protein (87aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000365DBDB
Tax=RBG_16_Spirochaetes_49_21_curated
B_1_S1_Biohub_coassembly_k141_4452442_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2420..3889)
DNA (1470bp) protein (490aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C74EDD
hyalin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
B_1_S1_Biohub_coassembly_k141_4452442_5
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

4397..4855
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BHF5_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4452442_6
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

4857..5768
DNA (912bp) protein (304aa)
putative membrane protease subunit HflC bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
SPFH domain, Band 7 family protein precursor
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4452442_7
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(6220..6891)
DNA (672bp) protein (224aa)
Transcriptional regulator Tax=Dehalococcoides mccartyi GY50 RepID=V5Q9D7_9CHLR
transcriptional regulator
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4452442_8
unknown

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7061..7237
DNA (177bp) protein (59aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4452442_9
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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comp(7319..8110)
DNA (792bp) protein (264aa)
Prolipoprotein diacylglyceryl transferase bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
prolipoprotein diacylglyceryl transferase
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4452442_10
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8142..8675)
DNA (534bp) protein (178aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4452442_11
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8672..9160)
DNA (489bp) protein (163aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_4452442_12
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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comp(9170..9733)
DNA (564bp) protein (188aa)
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_4452442_13
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9853..10524)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2Q5_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_52_11_curated
B_1_S1_Biohub_coassembly_k141_4452442_14
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(10616..11560)
DNA (945bp) protein (315aa)
Oxidoreductase molybdopterin binding Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMG8_ROSCS
sulfite oxidase subunit YedY
Tax=RBG_16_Chloroflexi_47_49_curated
B_1_S1_Biohub_coassembly_k141_4452442_15
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(11604..12743)
DNA (1140bp) protein (380aa)
Alcohol dehydrogenase GroES domain protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0R4_DEHLB
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADJ26192.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
B_1_S1_Biohub_coassembly_k141_4452442_16

Not on your lists

13022..13723
DNA (702bp) protein (234aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZX4_DEHLB
Marine sediment metagenome DNA, contig: S01H1_S32882 {ECO:0000313|EMBL:GAG28901.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_4452442_17
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13724..14638)
DNA (915bp) protein (305aa)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0R3_DEHLB
6-phosphogluconate dehydrogenase
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4452442_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14658..17387)
DNA (2730bp) protein (910aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Glucose-6-phosphate isomerase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMT9_KORVE
bifunctional transaldolase/phosoglucose isomerase
B_1_S1_Biohub_coassembly_k141_4452442_19
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(17394..17858)
DNA (465bp) protein (155aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB family Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FRH1_DEHSB
Ribose-5-phosphate isomerase, putative {ECO:0000313|EMBL:AAW40058.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
B_1_S1_Biohub_coassembly_k141_4452442_20
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17855..19921)
DNA (2067bp) protein (689aa)
Transketolase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZX6_DEHLB
transketolase
Tax=BJP_IG2069_Anaerolineales_43_63
B_1_S1_Biohub_coassembly_k141_4452442_21
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(19918..20598)
DNA (681bp) protein (227aa)
arylformamidase (EC:3.5.1.9)
Arylformamidase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0N3_DEHLB
Tax=RBG_13_Chloroflexi_48_17_curated
B_1_S1_Biohub_coassembly_k141_4452442_22
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

21081..21764
DNA (684bp) protein (228aa)
LexA repressor Tax=Dehalococcoides mccartyi DCMB5 RepID=M1QXE1_9CHLR
LexA family transcriptional regulator
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4452442_23
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(22005..22649)
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPY1_ACEAZ
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4452442_24
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22649..23590)
DNA (942bp) protein (314aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase Tax=Dehalococcoides mccartyi GY50 RepID=V5Q977_9CHLR
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4452442_25

Not on your lists

comp(23779..24132)
DNA (354bp) protein (118aa)
Histidine triad domain protein Tax=Clostridium sp. CAG:343 RepID=R6N2S0_9CLOT
Marine sediment metagenome DNA, contig: S06H3_S26298 {ECO:0000313|EMBL:GAI46731.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
histidine triad (HIT) protein
B_1_S1_Biohub_coassembly_k141_4452442_26
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24303..24476
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4S1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13344.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
B_1_S1_Biohub_coassembly_k141_4452442_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24436..24696
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4S0_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13343.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
B_1_S1_Biohub_coassembly_k141_4452442_28
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(24710..26188)
DNA (1479bp) protein (493aa)
NADH-quinone oxidoreductase subunit N Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L5_DEHLB
proton-translocating NADH-quinone oxidoreductase subunit N
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4452442_29
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(26317..27885)
DNA (1569bp) protein (523aa)
nuoM; NADH ubiquinone oxidoreductase chain M (EC:1.6.5.3)
NADH ubiquinone oxidoreductase chain M Tax=Dehalococcoides mccartyi BTF08 RepID=M1QZM4_9CHLR
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4452442_30
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(27926..29896)
DNA (1971bp) protein (657aa)
Proton-translocating NADH-quinone oxidoreductase, chain L Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L3_DEHLB
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RBG_16_Chloroflexi_51_9_curated
Displaying items 1-30 of 45 in total

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