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B_1_S1_Biohub_coassembly_k141_4724269

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4724269_1
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

325..3252
DNA (2928bp) protein (976aa)
cbdbA614; hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3356..4474)
DNA (1119bp) protein (373aa)
Putative oxygen-independent coproporphyrinogen III oxidase Tax=Firmicutes bacterium CAG:137 RepID=R6H6R4_9FIRM
oxygen-independent coproporphyrinogen III oxidase
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_4724269_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4471..6264)
DNA (1794bp) protein (598aa)
Elongation factor 4 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=LEPA_MOOTA
GTP-binding protein LepA
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_4724269_4
unknown

Not on your lists

comp(6583..7275)
DNA (693bp) protein (231aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4724269_5
unknown

Not on your lists

comp(7412..7513)
DNA (102bp) protein (34aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4724269_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7506..8072)
DNA (567bp) protein (189aa)
FMN reductase Tax=planctomycete KSU-1 RepID=I3IK88_9PLAN
putative NADPH:quinone oxidoreductase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
B_1_S1_Biohub_coassembly_k141_4724269_7
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

8227..8976
DNA (750bp) protein (250aa)
Putative uncharacterized protein bin=GWA2_OP3_53_43 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9194..10345)
DNA (1152bp) protein (384aa)
rca:Rcas_1503 integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_9
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(10338..11045)
DNA (708bp) protein (236aa)
two component transcriptional regulator, winged helix family bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
XRE family transcriptional regulator
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4724269_10
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(11387..11767)
DNA (381bp) protein (127aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4724269_11
unknown

Not on your lists

comp(11859..12218)
DNA (360bp) protein (120aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4724269_12

Not on your lists

12415..12777
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Dehalococcoides sp. (strain VS) RepID=D2BGL2_DEHSV
Marine sediment metagenome DNA, contig: S03H2_L01211 {ECO:0000313|EMBL:GAH46491.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4724269_13
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

12968..14257
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi GY50 RepID=V5QAZ5_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4724269_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

14304..15566
DNA (1263bp) protein (421aa)
hom; homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] bin=bin5_DeltaP species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
homoserine dehydrogenase ThrA (EC:1.1.1.3)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_15
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

15717..15968
DNA (252bp) protein (84aa)
XRE family transcriptional regulator bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
XRE family transcriptional regulator
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_16
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

16304..17593
DNA (1290bp) protein (430aa)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2B6_9BACT bin=RBG2 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4724269_17
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17916..18755)
DNA (840bp) protein (280aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDN6_9CHLR bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
HemK family modification methylase
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_18
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18752..19825)
DNA (1074bp) protein (358aa)
dly:Dehly_0966 peptide chain release factor 1; K02835 peptide chain release factor RF-1 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
peptide chain release factor 1
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_19
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

20062..20409
DNA (348bp) protein (116aa)
Uncharacterized protein bin=GWB1_Spirochaetes_59_5 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_trna_1
unknown

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comp(20466..20539)
DNA (74bp)
transferRNA Asp
B_1_S1_Biohub_coassembly_k141_4724269_20
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

20782..21192
DNA (411bp) protein (137aa)
2-iminobutanoate/2-iminopropanoate deaminase; EC=3.5.99.10;; Enamine/imine deaminase; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).;"
endoribonuclease L-PSP Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003712F94
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4724269_21
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

21336..21737
DNA (402bp) protein (134aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PY38_9FIRM
NADPH-dependent 7-cyano-7-deazaguanine reductase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_22
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(21914..22855)
DNA (942bp) protein (314aa)
Putative uncharacterized protein Tax=Methanococcus maripaludis X1 RepID=G0GZQ7_METMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK19788.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis X1.;"
B_1_S1_Biohub_coassembly_k141_4724269_23
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(22984..23238)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Nocardiopsis sp. CNS639 RepID=UPI0003782640
plasmid stabilization system
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_24
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(23219..23506)
DNA (288bp) protein (96aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_25
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(23778..23978)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Rhodothermus marinus RepID=D0MGZ8_RHOM4
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_26
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(23975..24253)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKP7_RHOMR
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4724269_27
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(24284..25603)
DNA (1320bp) protein (440aa)
DNA repair protein radA Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3ZAD8_DEHE1
DNA repair protein RadA
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_4724269_28
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists


comp(25733..28135)
DNA (2403bp) protein (801aa)
dly:Dehly_1235 phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4724269_29
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(28137..29174)
DNA (1038bp) protein (346aa)
dly:Dehly_1236 phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phenylalanyl-tRNA synthetase subunit alpha
Tax=RBG_16_Chloroflexi_50_9_curated
Displaying items 1-30 of 78 in total

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