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B_1_S1_Biohub_coassembly_k141_3159402

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3159402_1
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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1..882
-----------------
DNA (882bp)
protein (294aa)
Myo-inositol-1-phosphate synthase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR1_DEHLB
Myo-inositol-1-phosphate synthase
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_3159402_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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920..2050
-----------------
DNA (1131bp)
protein (377aa)
Glycosyl transferase group 1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR2_DEHLB
glycosyl transferase group 1 protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3159402_3

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2047..2733
-----------------
DNA (687bp)
protein (229aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S12H4_L00262 {ECO:0000313|EMBL:GAI87341.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CDP-alcohol-phosphatidyltransferase
B_1_S1_Biohub_coassembly_k141_3159402_4

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2832..4115
-----------------
DNA (1284bp)
protein (428aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZR4_DEHLB
Marine sediment metagenome DNA, contig: S01H4_L01661 {ECO:0000313|EMBL:GAG57491.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_3159402_5
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4533..4742)
-----------------
DNA (210bp)
protein (70aa)
Tax=GWC2_Deltaproteobacteria_42_11_curated
B_1_S1_Biohub_coassembly_k141_3159402_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4790..5230)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XER0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59138.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
B_1_S1_Biohub_coassembly_k141_3159402_7
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(5464..5943)
-----------------
DNA (480bp)
protein (160aa)
CHRD domain protein Tax=Cesiribacter andamanensis AMV16 RepID=M7P2K5_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_3159402_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(6250..7308)
-----------------
DNA (1059bp)
protein (353aa)
Membrane-associated zinc metalloprotease Tax=Dehalococcoides sp. (strain GT) RepID=D3SHM4_DEHSG
peptidase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_3159402_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(7302..8447)
-----------------
DNA (1146bp)
protein (382aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9I2_DEHE1
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_3159402_10
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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comp(8432..9295)
-----------------
DNA (864bp)
protein (288aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phosphatidate cytidylyltransferase
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_3159402_11

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comp(9289..10041)
-----------------
DNA (753bp)
protein (251aa)
uppS; UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9I0_DEHE1
Marine sediment metagenome DNA, contig: S12H4_S02036 {ECO:0000313|EMBL:GAI90904.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_3159402_12

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comp(10048..10605)
-----------------
DNA (558bp)
protein (186aa)
Ribosome-recycling factor Tax=Dehalococcoides ethenogenes (strain 195) RepID=RRF_DEHE1
Marine sediment metagenome DNA, contig: S06H3_L01159 {ECO:0000313|EMBL:GAI17745.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribosome recycling factor
B_1_S1_Biohub_coassembly_k141_3159402_13
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(10607..11347)
-----------------
DNA (741bp)
protein (247aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase Tax=Dehalococcoides ethenogenes (strain 195) RepID=PYRH_DEHE1
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_3159402_14

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comp(11361..11867)
-----------------
DNA (507bp)
protein (169aa)
Elongation factor Ts Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K140_DEHLB
Marine sediment metagenome DNA, contig: S01H4_S14004 {ECO:0000313|EMBL:GAG97525.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation elongation factor EFTs/EF1B dimerization
B_1_S1_Biohub_coassembly_k141_3159402_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(11890..12438)
-----------------
DNA (549bp)
protein (183aa)
30S ribosomal protein S2 Tax=Dehalococcoides mccartyi RepID=RS2_DEHSB
rpsB; 30S ribosomal protein S2
Tax=RBG_16_Chloroflexi_57_8_curated
Displaying 15 items

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