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RBG1351_3

Alias: RBG_1351c3_3

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_3_1
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..1145)
DNA (1143bp) protein (381aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIW2_MOOTA (db=UNIREF evalue=4.4e-78 bit_score=297.4 identity=41.5 coverage=97.9002624671916)
seg (db=Seg db_id=seg from=227 to=242)
RBG1351_3_2
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(1268..2359)
DNA (1092bp) protein (364aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIW2_MOOTA (db=UNIREF evalue=5.3e-113 bit_score=413.3 identity=54.0 coverage=98.07692307692307)
seg (db=Seg db_id=seg from=326 to=338)
RBG1351_3_3
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(2325..2600)
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIW2_MOOTA (db=UNIREF evalue=3.2e-14 bit_score=83.2 identity=50.0 coverage=86.95652173913044)
RBG1351_3_4
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2602..3234)
DNA (633bp) protein (211aa)
B12 binding domain/Pterin binding enzyme Tax=RBG_16_Chloroflexi_56_11_curated
B12 binding domain/Pterin binding enzyme
B12 binding domain/Pterin binding enzyme n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4CEU0_9DELT (db=UNIREF evalue=3.2e-54 bit_score=217.2 identity=52.9 coverage=96.6824644549763)
no description (db=Gene3D db_id=G3DSA:1.10.1240.10 from=1 to=78 evalue=1.9e-09 interpro_id=IPR003759 interpro_description=Cobalamin (vitamin B12)-binding module, cap domain GO=Molecular Function: methionine synthase activity (GO:0008705), Biological Process: methionine biosynthetic process (GO:0009086), Molecular Function: cobalamin binding (GO:0031419), Molecular Function: metal ion binding (GO:0046872))
RBG1351_3_5
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3634..6222)
DNA (2589bp) protein (863aa)
Tax=RBG_13_Chloroflexi_51_18_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=26 to=38)
seg (db=Seg db_id=seg from=466 to=482)
RBG1351_3_6
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(6426..6896)
DNA (471bp) protein (157aa)
hypothetical protein Tax=RBG_13_Chloroflexi_52_12_curated
seg (db=Seg db_id=seg from=31 to=41)
RBG1351_3_7
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

7019..7600
DNA (582bp) protein (194aa)
transcriptional regulator Tax=RBG_13_Chloroflexi_52_12_curated
Putative transcriptional regulator n=1 Tax=Pusillimonas sp. T7-7 RepID=F4GTP3_PUSST (db=UNIREF evalue=1.4e-11 bit_score=75.5 identity=31.3 coverage=80.41237113402062)
IclR family transcriptional regulator
seg (db=Seg db_id=seg from=172 to=187)
RBG1351_3_8
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

7597..7833
DNA (237bp) protein (79aa)
transcriptional regulator Tax=RBG_13_Chloroflexi_52_12_curated
Transcriptional regulator IclR n=1 Tax=Natrinema pellirubrum DSM 15624 RepID=G4GKV8_9EURY (db=UNIREF evalue=1.9e-07 bit_score=60.5 identity=42.6 coverage=82.27848101265823)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=1 to=70 evalue=2.0e-06)
GAF domain-like (db=superfamily db_id=SSF55781 from=1 to=70 evalue=2.0e-10)
RBG1351_3_9
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(7882..8658)
DNA (777bp) protein (259aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_13_Chloroflexi_52_12_curated
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=84 Tax=Bacillus RepID=C2NLQ6_BACCE (db=UNIREF evalue=1.0e-46 bit_score=192.6 identity=42.7 coverage=93.82239382239382)
ADH_SHORT (db=PatternScan db_id=PS00061 from=142 to=170 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
RBG1351_3_10
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(8685..10247)
DNA (1563bp) protein (521aa)
FAD linked oxidase domain-containing protein Tax=RBG_16_Chloroflexi_56_11_curated
GlcD; FAD/FMN-containing dehydrogenase
FAD/FMN-containing dehydrogenase n=1 Tax=Clostridium sp. SY8519 RepID=F7V4A2_CLOSS (db=UNIREF evalue=5.7e-60 bit_score=237.7 identity=30.8 coverage=96.92898272552783)
seg (db=Seg db_id=seg from=379 to=388)
RBG1351_3_11
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10264..11532)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
CoB--CoM heterodisulfide reductase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYF7_9BACT (db=UNIREF evalue=5.2e-112 bit_score=410.2 identity=45.9 coverage=99.29078014184397)
hypothetical protein
hypothetical protein
RBG1351_3_12
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11563..11856)
DNA (294bp) protein (98aa)
FAD linked oxidase domain-containing protein Tax=RBG_16_Chloroflexi_56_11_curated
FAD linked oxidase domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYF8_9BACT (db=UNIREF evalue=5.4e-20 bit_score=102.4 identity=53.1 coverage=96.93877551020408)
FAD linked oxidase
D-LACTATE DEHYDROGENASE (GLYCOOXIREDUCTASE GLCD) (db=HMMPanther db_id=PTHR11748:SF6 from=67 to=96 evalue=3.9e-05)
RBG1351_3_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11807..13039)
DNA (1233bp) protein (411aa)
FAD linked oxidase domain-containing protein Tax=RBG_16_Chloroflexi_56_11_curated
FAD linked oxidase domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYF8_9BACT (db=UNIREF evalue=3.3e-71 bit_score=274.6 identity=40.6 coverage=86.37469586374696)
FAD linked oxidase domain-containing protein
seg (db=Seg db_id=seg from=356 to=362)
RBG1351_3_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13188..13814)
DNA (627bp) protein (209aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RBG_13_Chloroflexi_51_52_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=5 Tax=Dehalococcoides mccartyi RepID=KGUA_DEHSC (db=UNIREF evalue=7.9e-53 bit_score=212.6 identity=54.4 coverage=91.86602870813397)
coiled-coil (db=Coil db_id=coil from=137 to=166 evalue=NA)
RBG1351_3_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13804..14097)
DNA (294bp) protein (98aa)
hypothetical protein; K09777 hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
UPF0296 protein DehaBAV1_0033 n=5 Tax=Dehalococcoides mccartyi RepID=Y033_DEHSB (db=UNIREF evalue=6.6e-26 bit_score=122.1 identity=70.8 coverage=88.77551020408163)
Y036_DEHE1_Q3ZAF8; (db=BlastProDom db_id=PD063023 from=5 to=77 evalue=2.0e-25 interpro_id=IPR007169 interpro_description=Uncharacterised protein family UPF0296)
RBG1351_3_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

14692..17487
DNA (2796bp) protein (932aa)
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC Tax=RBG_13_Chloroflexi_51_52_curated
clpC; ATP-dependent Clp protease ATP-binding subunit
clpC; ATP-dependent Clp protease ATP-binding subunit
ATPase AAA-2 domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FSU5_DEHSB (db=UNIREF evalue=0.0 bit_score=1169.5 identity=73.4 coverage=86.80257510729615)
RBG1351_3_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

17607..17828
DNA (222bp) protein (74aa)
pyruvate carboxylase subunit B (EC:4.1.1.3); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] Tax=RBG_13_Chloroflexi_51_52_curated
biotin/lipoyl attachment domain-containing protein
Glutaconyl-CoA decarboxylase subunit gamma n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LEL7_9FIRM (db=UNIREF evalue=5.9e-11 bit_score=72.0 identity=49.3 coverage=89.1891891891892)
(db=HMMPfam db_id=PF00364 from=5 to=71 evalue=2.8e-18 interpro_id=IPR000089 interpro_description=Biotin/lipoyl attachment)
RBG1351_3_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

17915..18058
DNA (144bp) protein (48aa)
Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=21 to=34)
(db=HMMPfam db_id=PF04277 from=6 to=44 evalue=1.3e-07 interpro_id=IPR005899 interpro_description=Sodium ion-translocating decarboxylase GO=Molecular Function: oxaloacetate decarboxylase activity (GO:0008948), Molecular Function: sodium ion transmembrane transporter activity (GO:0015081), Cellular Component: membrane (GO:0016020), Biological Process: sodium ion export (GO:0071436))
RBG1351_3_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

18691..19257
DNA (567bp) protein (189aa)
sodium ion-translocating decarboxylase subunit beta Tax=RBG_13_Chloroflexi_51_52_curated
sodium ion-translocating decarboxylase subunit beta
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPA3_SYNFM (db=UNIREF evalue=8.7e-59 bit_score=232.3 identity=63.6 coverage=96.82539682539682)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
RBG1351_3_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(19334..20452)
DNA (1119bp) protein (373aa)
lipoprotein Tax=RBG_13_Chloroflexi_51_52_curated
lipoprotein
Lipoprotein, putative n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0C2_DICTD (db=UNIREF evalue=4.1e-36 bit_score=157.9 identity=32.0 coverage=90.3485254691689)
seg (db=Seg db_id=seg from=39 to=50)
RBG1351_3_21
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

22454..23119
DNA (666bp) protein (222aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RBG_13_Chloroflexi_51_18_curated
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Dehalococcoides mccartyi RepID=ISPD_DEHE1 (db=UNIREF evalue=4.2e-52 bit_score=210.3 identity=50.9 coverage=98.64864864864865)
seg (db=Seg db_id=seg from=120 to=132)
RBG1351_3_22
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

23121..23609
DNA (489bp) protein (163aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) Tax=RBG_13_Chloroflexi_51_18_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GEX0_9FIRM (db=UNIREF evalue=2.0e-48 bit_score=197.6 identity=62.3 coverage=93.86503067484662)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
ISPF (db=PatternScan db_id=PS01350 from=39 to=54 evalue=0.0 interpro_id=IPR020555 interpro_description=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO=Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (GO:0008685))
RBG1351_3_23
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

comp(23649..23852)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=RBG_16_Chloroflexi_48_7_curated
23649..23852 - ( gc_cont=0.485)
RBG1351_3_24
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

24324..25103
DNA (780bp) protein (260aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_13_Chloroflexi_51_52_curated
cysteinyl-tRNA synthetase
Cysteine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K309_DEHLB (db=UNIREF evalue=1.1e-67 bit_score=262.3 identity=53.1 coverage=97.3076923076923)
seg (db=Seg db_id=seg from=80 to=96)
RBG1351_3_25
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(25290..25427)
DNA (138bp) protein (46aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZR0_DEHLB (db=UNIREF evalue=1.5e-12 bit_score=76.6 identity=75.0 coverage=93.47826086956522)
RBG1351_3_26
unknown

Not on your lists

comp(25762..26151)
DNA (390bp) protein (130aa)
25762..26151 - ( gc_cont=0.528)
RBG1351_3_27
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

26718..26984
DNA (267bp) protein (89aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=6 to=15)
RBG1351_3_28
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(26977..27462)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Acetobacterium woodii DSM 1030 RepID=H6LJ67_ACEWD (db=UNIREF evalue=1.0e-07 bit_score=62.4 identity=31.9 coverage=69.75308641975309)
RBG1351_3_29
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(27509..31135)
DNA (3627bp) protein (1209aa)
SCC57A.34c; ABC transporter ATP-binding protein; K06148 ATP-binding cassette, subfamily C, bacterial Tax=RBG_13_Chloroflexi_51_52_curated
ABC transporter
ABC transporter
ABC transporter protein n=4 Tax=Streptomyces RepID=D6ADG1_STRFL (db=UNIREF evalue=3.6e-206 bit_score=724.5 identity=35.8 coverage=98.9247311827957)
RBG1351_3_30
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

31345..32475
DNA (1131bp) protein (377aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDC3_9CHLR (db=UNIREF evalue=6.2e-24 bit_score=117.5 identity=25.5 coverage=84.3501326259947)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=280 to=291 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Displaying items 1-30 of 69 in total

View Taxonomy