ggKbase home page

RBG1351_23

Alias: RBG_1351c3_23

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_23_1
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..720)
DNA (720bp) protein (240aa)
obgE; GTPase ObgE; K03979 GTP-binding protein Tax=RBG_13_Chloroflexi_51_52_curated
GTP-binding protein Obg/CgtA
GTPase obg n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K201_DEHLB (db=UNIREF evalue=8.1e-78 bit_score=295.8 identity=59.6 coverage=98.33333333333333)
seg (db=Seg db_id=seg from=171 to=189)
RBG1351_23_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(1036..2376)
DNA (1341bp) protein (447aa)
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RBG_13_Chloroflexi_51_52_curated
chromosomal replication initiation protein
chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA n=5 Tax=Dehalococcoides mccartyi RepID=Q3ZAJ3_DEHE1 (db=UNIREF evalue=8.5e-129 bit_score=466.1 identity=53.3 coverage=97.0917225950783)
RBG1351_23_3
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

2731..3669
DNA (939bp) protein (313aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_13_Chloroflexi_51_52_curated
Methionyl-tRNA formyltransferase n=1 Tax=Paenibacillus lactis 154 RepID=G4HES0_9BACL (db=UNIREF evalue=9.9e-76 bit_score=289.3 identity=48.4 coverage=95.84664536741214)
methionyl-tRNA formyltransferase
seg (db=Seg db_id=seg from=269 to=281)
RBG1351_23_4
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(3839..4027)
DNA (189bp) protein (63aa)
Tax=RBG_13_Chloroflexi_51_52_curated
3839..4027 - ( gc_cont=0.450)
RBG1351_23_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(4039..5400)
DNA (1362bp) protein (454aa)
sensor kinase, two-component system, OmpR family; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_13_Chloroflexi_51_52_curated
sensor histidine kinase (EC:2.7.13.3)
Putative sensor with HAMP domain n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2X2_9EURY (db=UNIREF evalue=3.7e-07 bit_score=62.0 identity=31.1 coverage=22.46696035242291)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
RBG1351_23_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

5702..6484
DNA (783bp) protein (261aa)
nucleoside triphosphate pyrophosphohydrolase MazG Tax=RBG_13_Chloroflexi_51_52_curated
nucleoside triphosphate pyrophosphohydrolase MazG
nucleoside triphosphate pyrophosphohydrolase MazG
MazG family protein n=3 Tax=Dehalococcoides mccartyi RepID=A5FPC0_DEHSB (db=UNIREF evalue=1.9e-80 bit_score=304.7 identity=53.9 coverage=97.70114942528735)
RBG1351_23_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

6524..6793
DNA (270bp) protein (90aa)
Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=20 to=38)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=1 to=56 evalue=4.3e-07 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
RBG1351_23_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

6790..7068
DNA (279bp) protein (93aa)
Tax=RBG_13_Chloroflexi_51_52_curated
RelE/StbE family addiction module toxin (db=KEGG evalue=2.2e-07 bit_score=60.1 identity=40.2 coverage=91.39784946236558)
Addiction module toxin, RelE/StbE family n=1 Tax=Thermococcus sp. AM4 RepID=B7R5D9_9EURY (db=UNIREF evalue=2.9e-07 bit_score=60.1 identity=40.2 coverage=91.39784946236558)
seg (db=Seg db_id=seg from=56 to=71)
RBG1351_23_9
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

7324..8517
DNA (1194bp) protein (398aa)
cofactor-independent phosphoglycerate mutase Tax=RBG_16_Chloroflexi_50_11_curated
putative homoserine kinase (EC:5.4.2.1)
putative homoserine kinase (EC:5.4.2.1)
Proposed homoserine kinase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K361_DEHLB (db=UNIREF evalue=1.9e-127 bit_score=461.5 identity=57.1 coverage=98.49246231155779)
RBG1351_23_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

8647..9867
DNA (1221bp) protein (407aa)
aspK; aspartate kinase, monofunctional class; K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_13_Chloroflexi_51_52_curated
aspK; aspartate kinase, monofunctional class
aspK; aspartate kinase, monofunctional class
Aspartokinase n=5 Tax=Dehalococcoides mccartyi RepID=A5FPB7_DEHSB (db=UNIREF evalue=3.4e-153 bit_score=547.0 identity=68.1 coverage=99.26289926289927)
RBG1351_23_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(9967..10185)
DNA (219bp) protein (73aa)
NifU-like protein Tax=RBG_13_Chloroflexi_51_52_curated
nitrogen-fixing protein NifU
Nitrogen-fixing NifU domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FPB6_DEHSB (db=UNIREF evalue=8.1e-21 bit_score=104.8 identity=72.2 coverage=97.26027397260275)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=72 evalue=2.5e-23)
RBG1351_23_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

10353..11159
DNA (807bp) protein (269aa)
TPR domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
TPR domain-containing protein
TPR repeat-containing protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FPC7_DEHSB (db=UNIREF evalue=4.0e-57 bit_score=227.3 identity=47.2 coverage=96.6542750929368)
seg (db=Seg db_id=seg from=247 to=262)
RBG1351_23_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


11175..13634
DNA (2460bp) protein (820aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_13_Chloroflexi_51_52_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=GYRA_DEHLB (db=UNIREF evalue=0.0 bit_score=1056.6 identity=63.4 coverage=99.02439024390245)
RBG1351_23_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13914..14531)
DNA (618bp) protein (206aa)
radical SAM protein Tax=RBG_13_Chloroflexi_51_52_curated
radical SAM protein
Radical SAM domain protein n=5 Tax=Dehalococcoides mccartyi RepID=D2BJV7_DEHSV (db=UNIREF evalue=9.2e-62 bit_score=242.3 identity=55.9 coverage=97.0873786407767)
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=1 to=157 evalue=1.9e-10 interpro_id=IPR023970 interpro_description=Methylthiotransferase/B12-binding/radical SAM-type)
RBG1351_23_15
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(15851..16717)
DNA (867bp) protein (289aa)
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_13_Chloroflexi_51_18_curated
prenyltransferase-like domain-containing protein
Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. VS RepID=D2BJP3_DEHSV (db=UNIREF evalue=1.8e-47 bit_score=195.3 identity=37.2 coverage=95.15570934256056)
RBG1351_23_16
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(16729..16899)
DNA (171bp) protein (57aa)
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_13_Chloroflexi_51_18_curated
seg (db=Seg db_id=seg from=36 to=54)
RBG1351_23_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(16930..17151)
DNA (222bp) protein (74aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DSE8_DESRL (db=UNIREF evalue=7.4e-14 bit_score=81.6 identity=52.1 coverage=91.8918918918919)
RBG1351_23_18
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

17650..18423
DNA (774bp) protein (258aa)
Tax=RBG_13_Chloroflexi_57_8_curated
seg (db=Seg db_id=seg from=241 to=254)
seg (db=Seg db_id=seg from=86 to=105)
RBG1351_23_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(18644..20578)
DNA (1935bp) protein (645aa)
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_13_Chloroflexi_51_52_curated
chaperone protein DnaK
chaperone protein DnaK
Chaperone protein DnaK n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K372_DEHLB (db=UNIREF evalue=0.0 bit_score=1029.2 identity=79.5 coverage=99.37984496124031)
RBG1351_23_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(20580..21143)
DNA (564bp) protein (188aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RBG_13_Chloroflexi_51_52_curated
CoA-transferase
Protein grpE n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K373_DEHLB (db=UNIREF evalue=4.2e-37 bit_score=160.2 identity=49.4 coverage=86.70212765957447)
coiled-coil (db=Coil db_id=coil from=30 to=54 evalue=NA)
RBG1351_23_21
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(21165..22202)
DNA (1038bp) protein (346aa)
hcrA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=RBG_13_Chloroflexi_51_52_curated
heat-inducible transcription repressor
heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA n=5 Tax=Dehalococcoides mccartyi RepID=HRCA_DEHE1 (db=UNIREF evalue=5.4e-83 bit_score=313.5 identity=44.1 coverage=97.39884393063583)
RBG1351_23_22
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

22399..23016
DNA (618bp) protein (206aa)
beta-lactamase domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
beta-lactamase domain-containing protein
Zn-dependent hydrolase of the beta-lactamase fold-like protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FPT4_DEHSB (db=UNIREF evalue=2.0e-64 bit_score=251.1 identity=55.7 coverage=98.05825242718447)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=2 to=182 evalue=3.9e-22)
RBG1351_23_23
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(23082..23366)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
Putative transcriptional regulator, AsnC family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKR0_9ACTN (db=UNIREF evalue=3.4e-19 bit_score=99.8 identity=50.0 coverage=89.47368421052632)
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=71 evalue=1.5e-07)
RBG1351_23_24
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

23790..25673
DNA (1884bp) protein (628aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] Tax=RBG_13_Chloroflexi_51_52_curated
phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Thermococcus barophilus MP RepID=F0LI31_THEBM (db=UNIREF evalue=3.3e-195 bit_score=687.2 identity=52.8 coverage=97.61146496815286)
RBG1351_23_25
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(25839..26573)
DNA (735bp) protein (245aa)
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_50_11_curated
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G5B1_CHLAD (db=UNIREF evalue=3.7e-25 bit_score=120.9 identity=28.2 coverage=96.73469387755102)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=13 to=241 evalue=1.8e-56)
RBG1351_23_26
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(26566..26739)
DNA (174bp) protein (58aa)
transcriptional regulator, LysR family Tax=RBG_13_Chloroflexi_51_18_curated
26566..26739 - ( gc_cont=0.506)
Displaying 26 items

View Taxonomy