Alias: RBG_1351c3_29
name | lists | location/seqs | annotations | notes |
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RBG1351_29_1
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria
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Not on your lists |
2..403
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DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_13_Chloroflexi_52_12_curated
DNA polymerase I
DNA polymerase I n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3A7_DEHLB (db=UNIREF evalue=1.1e-44 bit_score=184.9 identity=70.7 coverage=98.50746268656717)
no description (db=HMMSmart db_id=SM00482 from=1 to=97 evalue=1.2e-09 interpro_id=IPR001098 interpro_description=DNA-directed DNA polymerase, family A, palm domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
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RBG1351_29_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
406..1215
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mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RBG_13_Chloroflexi_51_52_curated
formamidopyrimidine-DNA glycosylase
Formamidopyrimidine-DNA glycosylase n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z6Q1_DEHE1 (db=UNIREF evalue=7.2e-75 bit_score=286.2 identity=52.2 coverage=98.14814814814815)
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=242 to=266 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
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RBG1351_29_3
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(1222..3366)
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F5/8 type C domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. HGF7 RepID=F5LI81_9BACL (db=UNIREF evalue=1.8e-19 bit_score=103.6 identity=24.2 coverage=68.8111888111888)
hypothetical protein
seg (db=Seg db_id=seg from=25 to=65)
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RBG1351_29_4
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(3391..4062)
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hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
hypothetical protein AATC3_12439 n=2 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026259A1 (db=UNIREF evalue=4.0e-71 bit_score=273.5 identity=58.7 coverage=92.85714285714286)
seg (db=Seg db_id=seg from=165 to=182)
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RBG1351_29_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(4480..5481)
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3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RBG_13_Chloroflexi_51_52_curated
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=5 Tax=Dehalococcoides mccartyi RepID=A5FPM5_DEHSB (db=UNIREF evalue=1.8e-131 bit_score=474.6 identity=72.7 coverage=99.10179640718563)
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RBG1351_29_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
5588..6283
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hypothetical protein; K07164 Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3D7_DEHLB (db=UNIREF evalue=1.3e-32 bit_score=145.6 identity=36.9 coverage=98.70689655172413)
coiled-coil (db=Coil db_id=coil from=104 to=146 evalue=NA)
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RBG1351_29_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
6280..6699
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ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_13_Chloroflexi_51_52_curated
ribonuclease H
Ribonuclease H n=3 Tax=Dehalococcoides mccartyi RepID=D3SHL5_DEHSG (db=UNIREF evalue=7.4e-39 bit_score=165.6 identity=59.8 coverage=93.57142857142857)
seg (db=Seg db_id=seg from=127 to=138)
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RBG1351_29_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
7303..8433
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Tax=RBG_13_Chloroflexi_51_52_curated
peptidase S41
peptidase S41
Carboxyl-terminal protease n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z9I9_DEHE1 (db=UNIREF evalue=1.7e-85 bit_score=322.0 identity=45.7 coverage=97.87798408488064)
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RBG1351_29_9
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
8462..9028
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Appr-1-p processing domain-containing protein Tax=RBG_16_Chloroflexi_50_11_curated
macro domain, possibly ADP-ribose binding module
Appr-1-p processing domain protein n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CMT6_DESK7 (db=UNIREF evalue=4.8e-49 bit_score=199.9 identity=61.5 coverage=88.35978835978835)
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RBG1351_29_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
9234..9380
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Tax=RBG_16_Chloroflexi_50_11_curated
9234..9380 + ( gc_cont=0.490)
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RBG1351_29_11
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
9337..9717
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hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=Q3ZZ92_DEHSC (db=UNIREF evalue=2.2e-18 bit_score=97.4 identity=47.2 coverage=83.46456692913385)
seg (db=Seg db_id=seg from=3 to=16)
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RBG1351_29_12
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
9951..11345
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hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=3 Tax=Dehalococcoides mccartyi RepID=A5FS99_DEHSB (db=UNIREF evalue=1.3e-156 bit_score=558.5 identity=59.7 coverage=98.06451612903226)
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RBG1351_29_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
11530..11958
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hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
Conserved protein n=1 Tax=Clostridium tetani E88 RepID=Q898M7_CLOTE (db=UNIREF evalue=1.8e-19 bit_score=101.3 identity=47.7 coverage=73.42657342657343)
CGGC domain-containing protein
coiled-coil (db=Coil db_id=coil from=116 to=140 evalue=NA)
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RBG1351_29_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
12042..12725
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Transporter, small conductance mechanosensitive ion channel (MscS) family Tax=RBG_13_Chloroflexi_51_52_curated
Transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WLF9_METH6 (db=UNIREF evalue=1.1e-63 bit_score=248.8 identity=55.5 coverage=92.10526315789474)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
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RBG1351_29_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
13114..13869
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phosphatidylethanolamine-binding protein; K06910 Tax=RBG_13_Chloroflexi_51_52_curated
Phosphatidylethanolamine-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRR7_9BACT (db=UNIREF evalue=2.1e-39 bit_score=168.3 identity=55.7 coverage=57.936507936507944)
phosphatidylethanolamine-binding protein
seg (db=Seg db_id=seg from=6 to=19)
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RBG1351_29_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
13930..14640
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hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein (db=KEGG evalue=4.2e-26 bit_score=123.6 identity=32.3 coverage=90.71729957805907)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQR8_9SPHN (db=UNIREF evalue=5.5e-26 bit_score=123.6 identity=32.3 coverage=90.71729957805907)
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
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RBG1351_29_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
14859..15872
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short-chain dehydrogenase/reductase SDR Tax=RBG_13_Chloroflexi_51_52_curated
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF65_KOSOT (db=UNIREF evalue=1.8e-43 bit_score=182.2 identity=43.2 coverage=74.2603550295858)
seg (db=Seg db_id=seg from=24 to=41)
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RBG1351_29_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
15883..16710
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hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T8B4_MYCVP (db=UNIREF evalue=6.1e-37 bit_score=160.2 identity=35.0 coverage=78.98550724637681)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
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RBG1351_29_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(16759..17919)
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4Fe-4S ferredoxin Tax=RBG_13_Chloroflexi_51_52_curated
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029B8_SOLUE (db=UNIREF evalue=3.6e-75 bit_score=287.7 identity=39.2 coverage=96.12403100775194)
seg (db=Seg db_id=seg from=261 to=269)
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RBG1351_29_20
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(18055..19815)
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hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
Putative uncharacterized protein n=3 Tax=Dehalococcoides mccartyi RepID=Q3ZZ94_DEHSC (db=UNIREF evalue=1.8e-70 bit_score=272.7 identity=32.9 coverage=99.48892674616695)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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RBG1351_29_21
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(19852..20547)
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hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=3 Tax=Dehalococcoides mccartyi RepID=Q3ZZ94_DEHSC (db=UNIREF evalue=7.5e-12 bit_score=76.6 identity=47.3 coverage=37.5)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
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