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RBG1351_30

Alias: RBG_1351c3_30

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_30_1
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(239..649)
DNA (411bp) protein (137aa)
transposase, orfA, IS3/IS911-family
Transposase, orfA, IS3/IS911-family {ECO:0000313|EMBL:AGG07289.1}; TaxID=1193806 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Deha
ISDet1, transposase orfA n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3ZAB5_DEHE1 (db=UNIREF evalue=1.9e-26 bit_score=124.4 identity=74.4 coverage=56.20437956204379)
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
RBG1351_30_2
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(708..1526)
DNA (819bp) protein (273aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72747.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27
Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3S2_EUBE2 (db=UNIREF evalue=4.5e-16 bit_score=90.9 identity=32.0 coverage=53.11355311355312)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=18 to=143 evalue=2.2e-07 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like)
RBG1351_30_3
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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1791..2138
DNA (348bp) protein (116aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=Q3ZZ92_DEHSC (db=UNIREF evalue=4.4e-13 bit_score=79.7 identity=43.6 coverage=85.34482758620689)
RBG1351_30_4
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(2334..3005)
DNA (672bp) protein (224aa)
CoA-substrate-specific enzyme activase Tax=RBG_13_Chloroflexi_57_8_curated
Putative CoA enzyme activase n=1 Tax=planctomycete KSU-1 RepID=I3IIH5_9PLAN (db=UNIREF evalue=2.1e-43 bit_score=181.4 identity=41.4 coverage=97.76785714285714)
CoA-substrate-specific enzyme activase
RBG1351_30_5
unknown

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3179..3469
DNA (291bp) protein (97aa)
3179..3469 + ( gc_cont=0.577)
RBG1351_30_6
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

4398..4616
DNA (219bp) protein (73aa)
Tax=RBG_16_Chloroflexi_58_8_curated
4398..4616 + ( gc_cont=0.493)
RBG1351_30_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(6903..7292)
DNA (390bp) protein (130aa)
Tax=RBG_13_Chloroflexi_51_52_curated
coiled-coil (db=Coil db_id=coil from=91 to=112 evalue=NA)
coiled-coil (db=Coil db_id=coil from=9 to=33 evalue=NA)
seg (db=Seg db_id=seg from=21 to=39)
RBG1351_30_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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7496..8197
DNA (702bp) protein (234aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RBG_13_Chloroflexi_51_52_curated
ribonuclease
Ribonuclease 3 n=5 Tax=Dehalococcoides mccartyi RepID=RNC_DEHSC (db=UNIREF evalue=1.0e-61 bit_score=242.3 identity=48.5 coverage=99.14529914529915)
RNASE_3_1 (db=PatternScan db_id=PS00517 from=43 to=51 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RBG1351_30_9
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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8255..8404
DNA (150bp) protein (50aa)
Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=10 to=21)
seg (db=Seg db_id=seg from=31 to=49)
RBG1351_30_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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8445..8726
DNA (282bp) protein (94aa)
acylphosphatase Tax=RBG_13_Chloroflexi_51_52_curated
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=ACYP_SORC5 (db=UNIREF evalue=4.5e-16 bit_score=89.4 identity=52.3 coverage=92.5531914893617)
ACYLPHOSPHATASE_1 (db=PatternScan db_id=PS00150 from=11 to=21 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
RBG1351_30_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(8745..9476)
DNA (732bp) protein (244aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FQN0_DEHSB (db=UNIREF evalue=5.9e-84 bit_score=316.2 identity=62.4 coverage=98.36065573770492)
hypothetical protein
hypothetical protein
RBG1351_30_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(9473..10123)
DNA (651bp) protein (217aa)
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RBG_13_Chloroflexi_51_52_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHH0_MOOTA (db=UNIREF evalue=6.1e-32 bit_score=143.3 identity=45.3 coverage=72.35023041474655)
seg (db=Seg db_id=seg from=3 to=15)
RBG1351_30_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(10137..11417)
DNA (1281bp) protein (427aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RBG_13_Chloroflexi_51_52_curated
molybdenum cofactor synthesis domain-containing protein
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC43_THET1 (db=UNIREF evalue=2.3e-99 bit_score=368.2 identity=46.9 coverage=93.6768149882904)
RBG1351_30_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(11420..12025)
DNA (606bp) protein (202aa)
molybdenum cofactor guanylyltransferase; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_13_Chloroflexi_51_52_curated
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZF4_DEHLB (db=UNIREF evalue=9.0e-46 bit_score=189.1 identity=46.0 coverage=98.51485148514851)
molybdenum cofactor guanylyltransferase
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=2 to=195 evalue=4.3e-39)
RBG1351_30_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

12194..13105
DNA (912bp) protein (304aa)
methyltransferase, putative, TIGR00027 family Tax=RBG_13_Chloroflexi_51_52_curated
methyltransferase, putative, TIGR00027 family
Methyltransferase, putative, TIGR00027 family n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4CC09_9DELT (db=UNIREF evalue=3.8e-56 bit_score=224.2 identity=43.1 coverage=93.0921052631579)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=68 to=280 evalue=1.2e-47)
RBG1351_30_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13113..14402)
DNA (1290bp) protein (430aa)
HAD-superfamily hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RBG_13_Chloroflexi_51_52_curated
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=F2JNR9_CELLD (db=UNIREF evalue=1.6e-60 bit_score=239.2 identity=33.7 coverage=94.88372093023256)
RBG1351_30_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(14410..15051)
DNA (642bp) protein (214aa)
Zn-dependent hydrolase Tax=RBG_13_Chloroflexi_51_52_curated
Zn-dependent hydrolase-like protein
Putative uncharacterized protein n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8LTY9_CLOCD (db=UNIREF evalue=2.0e-51 bit_score=208.0 identity=48.1 coverage=97.66355140186917)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=212 evalue=9.7e-26)
RBG1351_30_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(15071..16567)
DNA (1497bp) protein (499aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RBG_13_Chloroflexi_51_52_curated
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLF5_9BACT (db=UNIREF evalue=9.1e-148 bit_score=529.3 identity=53.5 coverage=98.79759519038076)
RBG1351_30_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(16582..17169)
DNA (588bp) protein (196aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Kinase-like protein n=3 Tax=Dehalococcoides mccartyi RepID=A5FQN3_DEHSB (db=UNIREF evalue=1.3e-28 bit_score=132.1 identity=34.4 coverage=93.36734693877551)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=21 to=195 evalue=2.4e-24)
RBG1351_30_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(17203..18015)
DNA (813bp) protein (271aa)
DegV Tax=RBG_13_Chloroflexi_51_52_curated
fatty acid-binding protein DegV
DegV n=1 Tax=Dehalococcoides sp. VS RepID=D2BI73_DEHSV (db=UNIREF evalue=6.6e-60 bit_score=236.5 identity=46.7 coverage=94.4649446494465)
seg (db=Seg db_id=seg from=99 to=116)
RBG1351_30_21
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(18115..18387)
DNA (273bp) protein (91aa)
transmembrane_regions 152..174 Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
seg (db=Seg db_id=seg from=21 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
RBG1351_30_22
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(19116..19289)
DNA (174bp) protein (58aa)
transcriptional regulator, PadR-like family Tax=RBG_13_Chloroflexi_51_18_curated
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=51 evalue=1.4e-06)
(db=HMMPfam db_id=PF03551 from=1 to=32 evalue=2.4e-06 interpro_id=IPR005149 interpro_description=Transcription regulator PadR N-terminal)
Displaying 22 items

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