ggKbase home page

RBG9_2

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG9_2_1
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
Single-stranded nucleic acid binding R3H n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SEQ6_9CHLR (db=UNIREF evalue=5.0e-26 bit_score=122.5 identity=66.0 coverage=98.96907216494846)
hypothetical protein
RBG9_2_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(289..1275)
DNA (987bp) protein (329aa)
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZ58_ANATU (db=UNIREF evalue=3.4e-34 bit_score=151.4 identity=34.0 coverage=85.1063829787234)
seg (db=Seg db_id=seg from=285 to=300)
RBG9_2_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

1596..2126
DNA (531bp) protein (177aa)
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:ACM06703.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain A
Membrane spanning protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L5G3_THERP (db=UNIREF evalue=1.4e-26 bit_score=125.2 identity=42.2 coverage=94.91525423728814)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=156)
RBG9_2_4
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

2123..2323
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=49 to=64)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=5.0)
RBG9_2_5
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

2337..2936
DNA (600bp) protein (200aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=7.0)
RBG9_2_6
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

2968..3498
DNA (531bp) protein (177aa)
hypothetical protein Tax=RBG_16_Chloroflexi_54_11_curated
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=5.0)
RBG9_2_7
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

3667..4527
DNA (861bp) protein (287aa)
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=CG_Anaero_02
ABC transporter
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9J6_SPHTD (db=UNIREF evalue=9.7e-70 bit_score=269.2 identity=50.0 coverage=97.90940766550523)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=147 to=161 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
RBG9_2_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4517..5392
DNA (876bp) protein (292aa)
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ40489.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9J6_SPHTD (db=UNIREF evalue=6.0e-59 bit_score=233.4 identity=46.8 coverage=92.8082191780822)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=13 to=249 evalue=3.3e-83)
RBG9_2_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

5376..6185
DNA (810bp) protein (270aa)
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RBG_16_Chloroflexi_63_12_curated
cobalt transport protein
Cobalt transport protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9J5_SPHTD (db=UNIREF evalue=5.4e-38 bit_score=163.7 identity=38.7 coverage=95.55555555555556)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
RBG9_2_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6250..7257
DNA (1008bp) protein (336aa)
AIR synthase-like protein Tax=CSP1_6_Rokubacteria
AIR synthase-like protein
AIR synthase related protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3G2_SPHTD (db=UNIREF evalue=4.9e-81 bit_score=307.0 identity=50.3 coverage=99.10714285714286)
seg (db=Seg db_id=seg from=223 to=234)
RBG9_2_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

7471..7884
DNA (414bp) protein (138aa)
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
GntR family transcriptional regulator
GntR family transcriptional regulator n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MY97_ANATU (db=UNIREF evalue=8.1e-30 bit_score=135.6 identity=53.9 coverage=91.30434782608695)
(db=HMMPfam db_id=PF00392 from=14 to=76 evalue=1.4e-18 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
RBG9_2_12
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

7909..8547
DNA (639bp) protein (213aa)
hypothetical protein Tax=RBG_13_Chloroflexi_66_10_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MY98_ANATU (db=UNIREF evalue=2.7e-64 bit_score=250.8 identity=57.3 coverage=98.59154929577466)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
Displaying 12 items

View Taxonomy