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RBG9_18

Alias: RBG9_25

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG9_18_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

1..558
DNA (558bp) protein (186aa)
coiled-coil 58..86 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
coiled-coil (db=Coil db_id=coil from=58 to=86 evalue=NA)
RBG9_18_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

662..1243
DNA (582bp) protein (194aa)
coiled-coil 67..88 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
coiled-coil (db=Coil db_id=coil from=67 to=88 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
seg (db=Seg db_id=seg from=17 to=35)
RBG9_18_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

1290..2165
DNA (876bp) protein (292aa)
type IV pilus assembly family protein; K02662 type IV pilus assembly protein PilM Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
pilM; type IV pilus assembly protein PilM
Type IV pilus assembly family protein n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6T0_DEHE1 (db=UNIREF evalue=3.1e-39 bit_score=167.9 identity=30.4 coverage=97.94520547945206)
seg (db=Seg db_id=seg from=17 to=28)
RBG9_18_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

2172..2915
DNA (744bp) protein (248aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Prepilin peptidase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1F0_DEHLB (db=UNIREF evalue=7.6e-55 bit_score=219.5 identity=47.4 coverage=95.96774193548387)
prepilin peptidase (EC:3.4.23.43)
seg (db=Seg db_id=seg from=225 to=236)
RBG9_18_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

2917..3978
DNA (1062bp) protein (354aa)
pilT-1; twitching mobility protein; K02669 twitching motility protein PilT Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Twitching motility protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ23_9FIRM (db=UNIREF evalue=2.3e-105 bit_score=387.9 identity=58.7 coverage=98.58757062146893)
twitching motility protein PilT
twitching motility protein PilT
RBG9_18_6
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

4241..4576
DNA (336bp) protein (112aa)
general secretion protein G Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
general secretion pathway protein
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=10 to=30 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
seg (db=Seg db_id=seg from=32 to=49)
RBG9_18_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5075..5365)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
5075..5365 - ( gc_cont=0.663)
RBG9_18_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

7788..9002
DNA (1215bp) protein (405aa)
recF; DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
DNA replication and repair protein RecF n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z017_9CHLR (db=UNIREF evalue=1.8e-106 bit_score=391.7 identity=52.5 coverage=99.50617283950616)
recF; DNA replication and repair protein RecF
recF; DNA replication and repair protein RecF
RBG9_18_9
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

9476..10171
DNA (696bp) protein (232aa)
9476..10171 + ( gc_cont=0.614)
RBG9_18_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10027..10857)
DNA (831bp) protein (277aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N010_ANATU (db=UNIREF evalue=4.0e-44 bit_score=184.1 identity=38.0 coverage=97.83393501805054)
seg (db=Seg db_id=seg from=249 to=261)
RBG9_18_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11016..13598)
DNA (2583bp) protein (861aa)
putative two-component sensor histidine kinase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative two-component sensor histidine kinase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N2B6_ANATU (db=UNIREF evalue=3.7e-96 bit_score=358.6 identity=41.2 coverage=57.491289198606275)
putative two-component sensor histidine kinase
putative two-component sensor histidine kinase
RBG9_18_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13595..14008)
DNA (414bp) protein (138aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
threonine synthase
L-threonine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJB6_KORVE (db=UNIREF evalue=1.4e-10 bit_score=71.6 identity=42.4 coverage=65.94202898550725)
DEHYDRATASE_SER_THR (db=PatternScan db_id=PS00165 from=29 to=43 evalue=0.0 interpro_id=IPR000634 interpro_description=Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: pyridoxal phosphate binding (GO:0030170))
RBG9_18_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14459..16153)
DNA (1695bp) protein (565aa)
short-chain dehydrogenase/reductase SDR Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYB8_9BACT (db=UNIREF evalue=3.3e-146 bit_score=524.2 identity=47.5 coverage=99.64601769911503)
short-chain dehydrogenase/reductase SDR
short-chain dehydrogenase/reductase SDR
RBG9_18_14
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16417..16824)
DNA (408bp) protein (136aa)
hypothetical protein; K08972 putative membrane protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Hypothetical membrane protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N0Q5_ANATU (db=UNIREF evalue=1.1e-26 bit_score=125.2 identity=50.0 coverage=92.64705882352942)
seg (db=Seg db_id=seg from=59 to=72)
RBG9_18_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16945..17316)
DNA (372bp) protein (124aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1V2_ANATU (db=UNIREF evalue=6.4e-26 bit_score=122.5 identity=43.9 coverage=98.38709677419355)
RBG9_18_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17366..18343)
DNA (978bp) protein (326aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N0Q4_ANATU (db=UNIREF evalue=4.7e-28 bit_score=131.0 identity=32.3 coverage=95.39877300613497)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=16 to=169 evalue=2.3e-22 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
RBG9_18_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(18340..19443)
DNA (1104bp) protein (368aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XED3_9PSEU (db=UNIREF evalue=2.2e-13 bit_score=82.4 identity=27.5 coverage=49.45652173913043)
seg (db=Seg db_id=seg from=295 to=323)
RBG9_18_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19479..19850)
DNA (372bp) protein (124aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Hypothetical conserved protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SAK4_9CHLR (db=UNIREF evalue=8.0e-29 bit_score=132.1 identity=49.6 coverage=97.58064516129032)
hypothetical protein
(db=HMMPfam db_id=PF09862 from=8 to=120 evalue=5.0e-40 interpro_id=IPR018658 interpro_description=Protein of unknown function DUF2089)
RBG9_18_19
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

comp(20007..20237)
DNA (231bp) protein (77aa)
20007..20237 - ( gc_cont=0.576)
RBG9_18_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

20332..21348
DNA (1017bp) protein (339aa)
putative aminotransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Aminotransferase class V n=1 Tax=uncultured prokaryote RepID=H5SIQ3_9ZZZZ (db=UNIREF evalue=1.1e-107 bit_score=395.6 identity=61.1 coverage=97.05014749262537)
putative aminotransferase
putative aminotransferase
RBG9_18_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

21345..22817
DNA (1473bp) protein (491aa)
transmembrane_regions 13..35 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=414 to=436)
transmembrane_regions (db=TMHMM db_id=tmhmm from=443 to=465)
seg (db=Seg db_id=seg from=114 to=128)
RBG9_18_22
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

22817..24076
DNA (1260bp) protein (420aa)
putative 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-)
putative 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-)
Putative 23S rRNA (Uracil-5-)-methyltransferase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZG0_ANATU (db=UNIREF evalue=2.5e-106 bit_score=391.3 identity=47.2 coverage=97.14285714285714)
RBG9_18_23
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

24088..24873
DNA (786bp) protein (262aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
inositol monophosphatase
Inositol monophosphatase n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B800_HERA2 (db=UNIREF evalue=4.4e-61 bit_score=240.4 identity=47.4 coverage=95.0381679389313)
seg (db=Seg db_id=seg from=64 to=74)
RBG9_18_24
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(25216..25923)
DNA (708bp) protein (236aa)
surE; 5'-nucleotidase (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
5'-nucleotidase SurE 1 n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SAL7_9CHLR (db=UNIREF evalue=1.4e-77 bit_score=295.0 identity=67.7 coverage=91.52542372881356)
surE; 5'-nucleotidase (EC:3.1.3.5)
seg (db=Seg db_id=seg from=109 to=135)
RBG9_18_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(26083..26715)
DNA (633bp) protein (211aa)
hypothetical protein; K06950 uncharacterized protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZG5_ANATU (db=UNIREF evalue=3.1e-65 bit_score=253.8 identity=61.6 coverage=99.0521327014218)
seg (db=Seg db_id=seg from=44 to=62)
RBG9_18_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27004..27216
DNA (213bp) protein (71aa)
cold-shock protein, DNA-binding; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Cold-shock DNA-binding protein family n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D133_9BACT (db=UNIREF evalue=4.6e-13 bit_score=79.0 identity=53.0 coverage=91.54929577464789)
cold-shock protein, DNA-binding
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=4 to=70 evalue=1.3e-21 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
RBG9_18_27
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27411..29057
DNA (1647bp) protein (549aa)
hypothetical protein; K12574 ribonuclease J [EC:3.1.-.-] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N669_ANATU (db=UNIREF evalue=1.2e-209 bit_score=734.9 identity=64.4 coverage=99.27140255009107)
RBG9_18_28
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

29268..30179
DNA (912bp) protein (304aa)
hypothetical protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N0C6_ANATU (db=UNIREF evalue=1.5e-57 bit_score=228.8 identity=44.6 coverage=97.36842105263158)
seg (db=Seg db_id=seg from=24 to=49)
RBG9_18_29
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

30204..30953
DNA (750bp) protein (250aa)
laminin G domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Rhs element Vgr family protein
Polymorphic outer membrane protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UKT4_9CYAN (db=UNIREF evalue=1.4e-08 bit_score=65.9 identity=31.1 coverage=68.4)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
RBG9_18_30
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(31228..32337)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N370_ANATU (db=UNIREF evalue=5.3e-52 bit_score=210.7 identity=48.8 coverage=56.75675675675676)
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=297 to=325 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
Displaying items 1-30 of 160 in total

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