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RBG9_25

Alias: RBG9_33

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG9_25_1
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

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443..844
DNA (402bp) protein (134aa)
seg (db=Seg db_id=seg from=24 to=49)
RBG9_25_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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1081..2127
DNA (1047bp) protein (349aa)
putative transposase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative transposase
putative transposase
Putative transposase n=2 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I4H7_CALAS (db=UNIREF evalue=1.5e-112 bit_score=411.8 identity=63.7 coverage=89.68481375358166)
RBG9_25_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(2402..3529)
DNA (1128bp) protein (376aa)
PAS domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RTK0_TRIAD (db=UNIREF evalue=1.2e-62 bit_score=246.1 identity=39.0 coverage=94.41489361702128)
PAS domain-containing protein
GUANYLATE_CYCLASE_1 (db=PatternScan db_id=PS00452 from=295 to=318 evalue=0.0 interpro_id=IPR018297 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase, conserved site GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signal transduction (GO:0035556))
RBG9_25_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(3526..4086)
DNA (561bp) protein (187aa)
heme NO binding domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
heme NO binding domain-containing protein
Heme NO binding domain protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZ76_NOSP7 (db=UNIREF evalue=4.9e-46 bit_score=189.9 identity=47.8 coverage=95.72192513368985)
Ligand-binding domain in the NO signalling and Golgi transport (db=superfamily db_id=SSF111126 from=1 to=183 evalue=1.2e-40 interpro_id=IPR024096 interpro_description=NO signalling/Golgi transport ligand-binding domain GO=Molecular Function: binding (GO:0005488))
RBG9_25_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(4475..4969)
DNA (495bp) protein (165aa)
Rieske (2Fe-2S) domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021B2_SOLUE (db=UNIREF evalue=2.7e-16 bit_score=90.9 identity=32.5 coverage=95.75757575757575)
no description (db=Gene3D db_id=G3DSA:2.102.10.10 from=83 to=156 evalue=1.2e-17 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation-reduction process (GO:0055114))
RBG9_25_6
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(4941..5306)
DNA (366bp) protein (122aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative uncharacterized protein n=1 Tax=Desulfosporosinus orientis DSM 765 RepID=G7WIH8_DESOD (db=UNIREF evalue=2.6e-16 bit_score=90.5 identity=37.3 coverage=98.36065573770492)
hypothetical protein
seg (db=Seg db_id=seg from=50 to=62)
RBG9_25_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5299..6339)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FXY3_9FIRM (db=UNIREF evalue=1.8e-49 bit_score=202.2 identity=36.9 coverage=80.69164265129683)
cycothcome C family protein
seg (db=Seg db_id=seg from=319 to=334)
RBG9_25_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6386..7231)
DNA (846bp) protein (282aa)
transmembrane_regions 23..40 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
seg (db=Seg db_id=seg from=139 to=152)
seg (db=Seg db_id=seg from=43 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=257 to=279)
RBG9_25_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(7353..8147)
DNA (795bp) protein (265aa)
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative formate dehydrogenase, gamma subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9Y8_9DELT (db=UNIREF evalue=6.7e-41 bit_score=173.3 identity=39.7 coverage=81.13207547169812)
formate dehydrogenase subunit gamma
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
RBG9_25_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8651..9076
DNA (426bp) protein (142aa)
seg 8..22 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
seg (db=Seg db_id=seg from=8 to=22)
RBG9_25_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(9034..11226)
DNA (2193bp) protein (731aa)
anaerobic dehydrogenase, typically selenocysteine-containing; K08352 thiosulfate reductase [EC:1.-.-.-] Tax=RBG_16_RIF_WS3X_71_46_curated
anaerobic dehydrogenase
anaerobic dehydrogenase
RBG9_25_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(11585..11764)
DNA (180bp) protein (60aa)
transmembrane_regions 20..42 Tax=RBG_16_RIF_WS3X_71_46_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
RBG9_25_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(11873..12154)
DNA (282bp) protein (94aa)
YeeE/YedE family protein (DUF395) Tax=RBG_16_RIF_WS3X_71_46_curated
YeeE/YedE family protein (DUF395)
YeeE/YedE family protein (DUF395) n=2 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4D8P4_9FIRM (db=UNIREF evalue=8.0e-21 bit_score=105.1 identity=51.1 coverage=96.80851063829788)
seg (db=Seg db_id=seg from=74 to=87)
RBG9_25_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12157..12690)
DNA (534bp) protein (178aa)
YeeE/YedE family protein (DUF395) Tax=RBG_16_RIF_WS3X_71_46_curated
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FXZ2_9FIRM (db=UNIREF evalue=5.2e-37 bit_score=159.8 identity=42.0 coverage=97.19101123595506)
YeeE/YedE family protein (DUF395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
RBG9_25_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12709..13620)
DNA (912bp) protein (304aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4D8P6_9FIRM (db=UNIREF evalue=4.4e-28 bit_score=131.0 identity=30.1 coverage=90.78947368421053)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
RBG9_25_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13640..13972)
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
ArsR family transcriptional regulator
ArsR family transcriptional regulator n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N148_ANATU (db=UNIREF evalue=2.1e-20 bit_score=104.0 identity=50.0 coverage=94.5945945945946)
(db=HMMPfam db_id=PF01022 from=22 to=67 evalue=1.9e-14 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
RBG9_25_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

14382..14564
DNA (183bp) protein (61aa)
recA; protein RecA; K03553 recombination protein RecA Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
recA; protein RecA
Protein RecA n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZ43_ANATU (db=UNIREF evalue=1.7e-08 bit_score=63.5 identity=56.1 coverage=98.36065573770492)
(db=HMMPfam db_id=PF00154 from=23 to=61 evalue=1.8e-06 interpro_id=IPR013765 interpro_description=DNA recombination and repair protein RecA GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
Displaying 17 items

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