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RBG9_52

Alias: RBG9_66

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Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG9_52_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

1243..1440
DNA (198bp) protein (66aa)
branched-chain amino acid transport Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
branched-chain amino acid transport (db=KEGG evalue=5.4e-08 bit_score=61.6 identity=44.6 coverage=96.96969696969697)
Branched-chain amino acid transport n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RR11_ACCPU (db=UNIREF evalue=7.1e-08 bit_score=61.6 identity=44.6 coverage=96.96969696969697)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=64)
RBG9_52_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

2574..3791
DNA (1218bp) protein (406aa)
cation efflux family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
cation efflux family protein
cation efflux family protein
Cation efflux family protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I6L2_CALAS (db=UNIREF evalue=6.3e-99 bit_score=366.7 identity=60.0 coverage=70.93596059113301)
RBG9_52_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3933..5576)
DNA (1644bp) protein (548aa)
serine/threonine protein kinase with PASTA sensor(s) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
serine/threonine protein kinase with PASTA sensor(s)
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1L0_ACIFD (db=UNIREF evalue=9.6e-58 bit_score=230.3 identity=33.3 coverage=88.86861313868614)
seg (db=Seg db_id=seg from=341 to=355)
RBG9_52_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5722..6015)
DNA (294bp) protein (98aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein OTW25_14886 n=1 Tax=Ornithinibacillus scapharcae TW25 RepID=UPI000225B3CC (db=UNIREF evalue=7.8e-19 bit_score=98.6 identity=48.5 coverage=96.93877551020408)
hypothetical protein
TIGR02118: conserved hypothetical protein (db=HMMTigr db_id=TIGR02118 from=1 to=96 evalue=2.9e-18 interpro_id=IPR009799 interpro_description=Ethyl tert-butyl ether degradation EthD)
RBG9_52_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6197..6685)
DNA (489bp) protein (163aa)
paaD; phenylacetic acid degradation protein; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
paaD; phenylacetic acid degradation protein
Phenylacetic acid degradation protein n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=Q67LH8_SYMTH (db=UNIREF evalue=1.3e-42 bit_score=178.3 identity=52.5 coverage=93.25153374233128)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=101 evalue=1.5e-26)
RBG9_52_6
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

7457..7678
DNA (222bp) protein (74aa)
seg (db=Seg db_id=seg from=59 to=70)
seg (db=Seg db_id=seg from=33 to=46)
RBG9_52_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7609..8172)
DNA (564bp) protein (188aa)
phenylacetate metabolism protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
phenylacetate metabolism protein
Phenylacetic acid degradation B n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PLS1_MEIRD (db=UNIREF evalue=4.6e-28 bit_score=130.2 identity=43.0 coverage=86.70212765957447)
(db=HMMPfam db_id=PF06243 from=90 to=168 evalue=1.9e-12 interpro_id=IPR009359 interpro_description=Phenylacetic acid degradation B)
RBG9_52_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8169..9119)
DNA (951bp) protein (317aa)
phenylacetate-CoA oxygenase subunit PaaG; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
phenylacetate-CoA oxygenase subunit PaaG
phenylacetate-CoA oxygenase subunit PaaG
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=D7BE25_MEISD (db=UNIREF evalue=1.5e-140 bit_score=504.6 identity=75.2 coverage=96.52996845425868)
RBG9_52_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(9134..10066)
DNA (933bp) protein (311aa)
enoyl-CoA hydratase/isomerase; K01661 naphthoate synthase [EC:4.1.3.36] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase n=2 Tax=mine drainage metagenome RepID=E6PCG9_9ZZZZ (db=UNIREF evalue=5.4e-82 bit_score=310.1 identity=59.0 coverage=80.06430868167203)
2-ketocyclohexane-carboxyl-CoA hydrolase, BadI
UniRef90_E6PCG9 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase n=2 Tax=mine drainage metagenome RepID=E6PCG9_9ZZZZ (db=UNIREF) rbh
RBG9_52_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10153..11760)
DNA (1608bp) protein (536aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=Q67SZ4_SYMTH (db=UNIREF evalue=1.6e-102 bit_score=379.0 identity=44.2 coverage=93.28358208955224)
RBG9_52_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12211..13938)
DNA (1728bp) protein (576aa)
phosphoribulokinase/uridine kinase family protein; K00876 uridine kinase [EC:2.7.1.48] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
phosphoribulokinase/uridine kinase family protein
phosphoribulokinase/uridine kinase family protein
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3X4_ANATU (db=UNIREF evalue=1.9e-197 bit_score=694.5 identity=60.7 coverage=97.22222222222221)
RBG9_52_12
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(14523..15134)
DNA (612bp) protein (204aa)
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RBG_16_Chloroflexi_48_8_curated
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 n=1 Tax=uncultured Chloroflexi bacterium RepID=H5S992_9CHLR (db=UNIREF evalue=7.4e-72 bit_score=275.8 identity=68.1 coverage=92.64705882352942)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=25 to=193 evalue=3.7e-28 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
RBG9_52_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16151..16447)
DNA (297bp) protein (99aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5J1_ANATU (db=UNIREF evalue=3.4e-22 bit_score=109.8 identity=56.2 coverage=94.94949494949495)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=95 evalue=9.9e-11 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
RBG9_52_14
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17202..17669
DNA (468bp) protein (156aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_10_curated
17202..17669 + ( gc_cont=0.605)
RBG9_52_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17651..18043)
DNA (393bp) protein (131aa)
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
gcvH; glycine cleavage system H protein
Glycine cleavage system H protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5J0_ANATU (db=UNIREF evalue=1.4e-36 bit_score=157.9 identity=53.8 coverage=98.47328244274809)
LIPOYL (db=PatternScan db_id=PS00189 from=48 to=77 evalue=0.0 interpro_id=IPR003016 interpro_description=2-oxo acid dehydrogenase, lipoyl-binding site)
RBG9_52_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(18667..18966)
DNA (300bp) protein (100aa)
4-aminobutyrate aminotransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
4-aminobutyrate aminotransferase n=1 Tax=Moorea producta 3L RepID=F4XS16_9CYAN (db=UNIREF evalue=6.3e-16 bit_score=89.0 identity=58.8 coverage=76.0)
4-aminobutyrate aminotransferase
RBG9_52_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19117..19851)
DNA (735bp) protein (245aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
ABC transporter-like protein
ABC transporter-like protein
ABC transporter related protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CF01_THET1 (db=UNIREF evalue=4.7e-89 bit_score=333.2 identity=69.8 coverage=95.51020408163265)
RBG9_52_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19848..20633)
DNA (786bp) protein (262aa)
amino acid ABC transporter ATP-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
amino acid ABC transporter ATP-binding protein
amino acid ABC transporter ATP-binding protein
ATP-binding protein of branched-chain amino acid ABC transporter n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FZU0_9CYAN (db=UNIREF evalue=1.3e-81 bit_score=308.5 identity=63.5 coverage=95.41984732824427)
RBG9_52_19
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(20633..21889)
DNA (1257bp) protein (419aa)
amino acid ABC transporter Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
amino acid ABC transporter
amino acid ABC transporter
Inner-membrane translocator n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF1_RUBXD (db=UNIREF evalue=5.0e-83 bit_score=313.9 identity=45.8 coverage=87.11217183770883)
RBG9_52_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(21902..22843)
DNA (942bp) protein (314aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR3_9BACT (db=UNIREF evalue=7.1e-82 bit_score=309.7 identity=50.3 coverage=97.13375796178345)
amino acid/amide ABC transporter membrane protein 1, HAAT family
UniRef90_I4EJR3 ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR3_9BACT (db=UNIREF) rbh
RBG9_52_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23019..24302)
DNA (1284bp) protein (428aa)
amino acid ABC transporter substrate-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
amino acid ABC transporter substrate-binding protein
Putative ABC-type branched-chain amino acid transport systems, periplasmic binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR4_9BACT (db=UNIREF evalue=2.3e-67 bit_score=261.9 identity=38.6 coverage=88.3177570093458)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
RBG9_52_22
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

25269..26321
DNA (1053bp) protein (351aa)
proline racemase; K01777 proline racemase [EC:5.1.1.4] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
proline racemase
proline racemase
Proline racemase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NFY3_ROSCS (db=UNIREF evalue=7.1e-147 bit_score=525.8 identity=70.3 coverage=99.43019943019942)
RBG9_52_23
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(26365..27474)
DNA (1110bp) protein (370aa)
alr; alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Alanine racemase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4H9_ANATU (db=UNIREF evalue=5.4e-105 bit_score=386.7 identity=53.8 coverage=98.64864864864865)
alr; alanine racemase (EC:5.1.1.1)
alr; alanine racemase (EC:5.1.1.1)
RBG9_52_24
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27819..29612
DNA (1794bp) protein (598aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
hypothetical protein
Hypothetical membrane protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1B2_ANATU (db=UNIREF evalue=6.2e-135 bit_score=486.9 identity=42.7 coverage=99.66555183946488)
RBG9_52_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

29609..30730
DNA (1122bp) protein (374aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
tgt; queuine tRNA-ribosyltransferase
tgt; queuine tRNA-ribosyltransferase
Queuine tRNA-ribosyltransferase n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I5G3_CALAS (db=UNIREF evalue=5.8e-123 bit_score=446.4 identity=60.1 coverage=97.32620320855615)
RBG9_52_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

30734..31558
DNA (825bp) protein (275aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4H7_ANATU (db=UNIREF evalue=7.6e-72 bit_score=276.2 identity=56.5 coverage=97.0909090909091)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=62)
RBG9_52_27
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

comp(31634..31969)
DNA (336bp) protein (112aa)
seg (db=Seg db_id=seg from=82 to=92)
RBG9_52_28
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

comp(32461..32595)
DNA (135bp) protein (45aa)
32461..32595 - ( gc_cont=0.585)
RBG9_52_29
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(32628..33299)
DNA (672bp) protein (224aa)
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
beta-lactamase-like protein
Beta-lactamase-like protein n=1 Tax=Truepera radiovictrix DSM 17093 RepID=D7CRQ5_TRURR (db=UNIREF evalue=1.3e-48 bit_score=198.7 identity=47.7 coverage=92.85714285714286)
seg (db=Seg db_id=seg from=65 to=78)
RBG9_52_30
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

33500..34879
DNA (1380bp) protein (460aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
tryptophanase (EC:4.1.99.1)
tryptophanase (EC:4.1.99.1)
Tryptophanase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUQ5_9BACT (db=UNIREF evalue=2.8e-159 bit_score=567.4 identity=61.9 coverage=98.04347826086956)
Displaying items 1-30 of 230 in total

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