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SR-VP_26_10_2019_C_20cm_scaffold_7559

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_7559_1
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(2..580)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI00036F454C
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:AEA12375.1}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzoniensis (strain 768-20).;"
SR-VP_26_10_2019_C_20cm_scaffold_7559_2
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(635..1909)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037F06C3
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABL77705.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
SR-VP_26_10_2019_C_20cm_scaffold_7559_3
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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2033..2908
DNA (876bp) protein (292aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8D7_9ARCH
branched-chain amino acid ABC transporter permease
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:AGK61755.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
SR-VP_26_10_2019_C_20cm_scaffold_7559_4
unknown

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2905..4008
DNA (1104bp) protein (368aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8D8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL72215.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
branched-chain amino acid ABC transporter permease
SR-VP_26_10_2019_C_20cm_scaffold_7559_5
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

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4200..5375
DNA (1176bp) protein (392aa)
Putative transport membrane protein n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6H5_9ARCH
Putative transport membrane protein {ECO:0000313|EMBL:ACF09899.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote AD1000-23-H12.;"
putative multidrug efflux MFS permease
SR-VP_26_10_2019_C_20cm_scaffold_7559_6
unknown

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5401..6228
DNA (828bp) protein (276aa)
Metallo-dependent hydrolase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KK71_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN81474.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidohydrolase
SR-VP_26_10_2019_C_20cm_scaffold_7559_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6225..6719
DNA (495bp) protein (165aa)
GCN5-like N-acetyltransferase n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BI17_9GAMM
GCN5-related N-acetyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(6726..7790)
DNA (1065bp) protein (355aa)
rRNA pseudouridine synthase, putative (EC:5.4.99.-)
Probable tRNA pseudouridine synthase B n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC89_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_9

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comp(7787..8395)
DNA (609bp) protein (203aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00054803}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00054803};; TaxID=1456179 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_52_H07.;"
Putative adenylate kinase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8O8 RepID=B3TBA3_9ARCH
cytidylate kinase
SR-VP_26_10_2019_C_20cm_scaffold_7559_10

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comp(8419..8886)
DNA (468bp) protein (156aa)
Putative integral membrane protein DUF106 n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T580_9ZZZZ
Putative integral membrane protein DUF106 {ECO:0000313|EMBL:ABZ07739.1}; TaxID=455535 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_ANIW141A21.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_7559_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(8883..9455)
DNA (573bp) protein (191aa)
adkA; adenylate kinase (EC:2.7.4.3)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T581_9ZZZZ
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_12
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(9472..10887)
DNA (1416bp) protein (472aa)
Protein translocase subunit SecY n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7B2_NITGG
protein translocase subunit secY/sec61 alpha
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_13
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(10909..11325)
DNA (417bp) protein (139aa)
Putative ribosomal protein L15 n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T583_9ZZZZ
rpl15p; 50S ribosomal protein L15p
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_14

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comp(11329..11796)
DNA (468bp) protein (156aa)
Putative ribosomal protein L30p/L7e n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T584_9ZZZZ
Putative ribosomal protein L30p/L7e {ECO:0000313|EMBL:ABZ07743.1}; TaxID=455535 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_ANIW141A21.;"
rpl30p; 50S ribosomal protein L30p
SR-VP_26_10_2019_C_20cm_scaffold_7559_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(11812..12447)
DNA (636bp) protein (212aa)
Putative ribosomal protein S5, N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T585_9ZZZZ
SSU ribosomal protein S5P
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(12457..13050)
DNA (594bp) protein (198aa)
50S ribosomal protein L18P n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RL18_META3
rpl18p; 50S ribosomal protein L18
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7559_17
unknown

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comp(13070..13192)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 17 items

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