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SR-VP_26_10_2019_C_20cm_scaffold_6880

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_6880_1
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

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1..513
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UC88_SALR5
Uncharacterized protein {ECO:0000313|EMBL:EFA84423.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
gamma-D-glutamyl-meso-diaminopimelate peptidase
SR-VP_26_10_2019_C_20cm_scaffold_6880_2
Lottia gigantea, Lottia, Gastropoda, Mollusca, Eukaryota

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530..1336
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZPQ7_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO93343.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
YadA domain-containing protein
SR-VP_26_10_2019_C_20cm_scaffold_6880_3
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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1437..2774
DNA (1338bp) protein (446aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:BAJ47292.1}; EC=1.1.1.22 {ECO:0000313|EMBL:BAJ47292.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000369340A
SR-VP_26_10_2019_C_20cm_scaffold_6880_4
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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2849..3703
DNA (855bp) protein (285aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIZ7_THET1
NAD-dependent epimerase/dehydratase
Tax=RBG_13_Nitrospirae_39_12_curated
SR-VP_26_10_2019_C_20cm_scaffold_6880_5

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3774..4694
DNA (921bp) protein (307aa)
Glycosyl transferase family 2 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S8D1_METSF
Glycosyl transferase {ECO:0000313|EMBL:AIE92593.1}; TaxID=1455902 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_24_H07.;"
glycosyl transferase family 2
SR-VP_26_10_2019_C_20cm_scaffold_6880_6

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4859..5740
DNA (882bp) protein (294aa)
glycosyltransferase, group 2 family protein (EC:2.4.-.-)
glycosyl transferase n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037C3C46
Glycosyl transferase {ECO:0000313|EMBL:AIF18247.1}; TaxID=1456303 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_82_C03.;"
SR-VP_26_10_2019_C_20cm_scaffold_6880_7
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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5873..7375
DNA (1503bp) protein (501aa)
Conserved membrane protein, Mvin family n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RK83_THETK
hypothetical protein
Conserved membrane protein, Mvin family {ECO:0000313|EMBL:CCC81978.1}; TaxID=768679 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra; 1).;"
SR-VP_26_10_2019_C_20cm_scaffold_6880_8
unknown

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7414..9294
DNA (1881bp) protein (627aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_6880_9
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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9390..10271
DNA (882bp) protein (294aa)
SAM-dependent methyltransferase n=1 Tax=Sulfolobus islandicus LAL14/1 RepID=M9UCN3_SULIS
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AGJ62296.1}; TaxID=1241935 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus LAL14/1.;"
SR-VP_26_10_2019_C_20cm_scaffold_6880_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10327..12270
DNA (1944bp) protein (648aa)
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:CDM66254.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CDM66254.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Asparagine synthetase id=4710303 bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
SR-VP_26_10_2019_C_20cm_scaffold_6880_11
RIFOXYA12_FULL_WOR_1_43_27_curated, Saganbacteria, Bacteria

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12273..13436
DNA (1164bp) protein (388aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT88_OSCVS
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
SR-VP_26_10_2019_C_20cm_scaffold_6880_12
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13560..14162
DNA (603bp) protein (201aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N0U9_9FIRM
formyl transferase
Displaying 12 items

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