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SR-VP_26_10_2019_C_20cm_scaffold_18816

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_18816_1
unknown

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comp(3..560)
DNA (558bp) protein (186aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_18816_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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664..1290
DNA (627bp) protein (209aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUP7_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_18816_3
unknown

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1354..1659
DNA (306bp) protein (102aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_18816_4
GWB1_OD1_45_9_partial, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1580..2221)
DNA (642bp) protein (214aa)
Type I signal peptidase {ECO:0000313|EMBL:KKU16155.1}; TaxID=1618653 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_45_9b.;"
SR-VP_26_10_2019_C_20cm_scaffold_18816_5
unknown

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2297..2608
DNA (312bp) protein (104aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_18816_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2658..3629
DNA (972bp) protein (324aa)
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) n=1 Tax=Caloramator australicus RC3 RepID=G0V4P5_9CLOT
Dipeptide transport system permease protein dppB (ABC transporter) {ECO:0000313|EMBL:KFC65326.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase
SR-VP_26_10_2019_C_20cm_scaffold_18816_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3629..4552
DNA (924bp) protein (308aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LQM8_TEPAE
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC65327.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dppC; dipeptide transporter ; membrane component of ABC superfamily
SR-VP_26_10_2019_C_20cm_scaffold_18816_8
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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4560..5546
DNA (987bp) protein (329aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) RepID=G4FDW9_THEMA
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACB08790.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
SR-VP_26_10_2019_C_20cm_scaffold_18816_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5546..6553
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:AEW06123.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEW06123.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
Oligopeptide ABC transporter ATP-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IB71_SULAT
oligopeptide ABC transporter ATP-binding protein
SR-VP_26_10_2019_C_20cm_scaffold_18816_10
unknown

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6629..6826
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 10 items

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