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SR-VP_26_10_2019_C_20cm_scaffold_10001

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_10001_1

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comp(57..1370)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037C9A40
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2019_C_20cm_scaffold_10001_2
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(1357..2574)
DNA (1218bp) protein (406aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
Cysteine--tRNA ligase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5G4_KORCO
cysteinyl-tRNA synthetase
SR-VP_26_10_2019_C_20cm_scaffold_10001_3
unknown

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2696..2992
DNA (297bp) protein (99aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_10001_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3331..5298
DNA (1968bp) protein (656aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AIF83304.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AIF83304.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=3 Tax=Archaea RepID=E6N970_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_10001_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5288..6256
DNA (969bp) protein (323aa)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:AIF83305.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AIF83305.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
2-oxoglutarate synthase subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEJ8_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_10001_6
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6258..7145)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00037A50C9
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:EFF91950.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
alkA; DNA-3-methyladenine glycosylase II
SR-VP_26_10_2019_C_20cm_scaffold_10001_7
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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7254..7817
DNA (564bp) protein (188aa)
Probable non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Probable non-canonical purine NTP phosphatase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHQ7_ARCPA
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_10001_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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7825..8142
DNA (318bp) protein (106aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
SR-VP_26_10_2019_C_20cm_scaffold_10001_9
unknown

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8133..8426
DNA (294bp) protein (98aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_10001_16S_1
unknown

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8679..10173
DNA (1495bp)
16S ribosomal RNA (16S rRNA)
Displaying 10 items

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