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08E140C01_scaffold_10_curated

Search features with annotation key words

Displaying items 1-30 of 448 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_10_curated_1
unknown

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2..283
DNA (282bp) protein (94aa)
Uncharacterized protein id=4185309 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
08E140C01_scaffold_10_curated_2
unknown

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280..1269
DNA (990bp) protein (330aa)
Uncharacterized protein id=4185311 bin=GWF2_Bacteroidetes_40_14 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein rbh
08E140C01_scaffold_10_curated_3
unknown

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1601..3526
DNA (1926bp) protein (642aa)
Uncharacterized protein id=1964337 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
08E140C01_scaffold_10_curated_4
unknown

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3539..5290
DNA (1752bp) protein (584aa)
Putative uncharacterized protein id=1964335 bin=GWE2_Bacteroidetes_39_28 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
08E140C01_scaffold_10_curated_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5874..6998
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000316C28E rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS19633.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Predicted ATPase (AAA+ superfamily) rbh
08E140C01_scaffold_10_curated_6
unknown

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comp(7752..8735)
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=4185313 bin=GWF2_Bacteroidetes_40_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
08E140C01_scaffold_10_curated_7
unknown

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8856..9320
DNA (465bp) protein (155aa)
Methylglyoxal synthase id=4524936 bin=GWF2_Bacteroidetes_40_14 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
08E140C01_scaffold_10_curated_8
unknown

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comp(9349..12195)
DNA (2847bp) protein (949aa)
SNF family helicase id=4598552 bin=GWF2_Bacteroidetes_41_9 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Superfamily II DNA/RNA helicases, SNF2 family rbh
08E140C01_scaffold_10_curated_9
unknown

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12376..12966
DNA (591bp) protein (197aa)
ECF subfamily RNA polymerase sigma-24 subunit id=2120385 bin=GWE2_Bacteroidetes_40_15 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
08E140C01_scaffold_10_curated_10
unknown

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comp(12926..14254)
DNA (1329bp) protein (443aa)
DNA mismatch repair protein MutS domain protein id=2120383 bin=GWE2_Bacteroidetes_40_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein rbh
08E140C01_scaffold_10_curated_11
unknown

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comp(14269..15606)
DNA (1338bp) protein (446aa)
DNA mismatch repair protein MutS domain-containing protein id=2120381 bin=GWE2_Bacteroidetes_40_15 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein rbh
08E140C01_scaffold_10_curated_12
unknown

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comp(15672..17975)
DNA (2304bp) protein (768aa)
Putative uncharacterized protein id=4413281 bin=GWF2_Bacteroidetes_41_61 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein rbh
08E140C01_scaffold_10_curated_13
unknown

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comp(17990..18916)
DNA (927bp) protein (309aa)
ABC-type multidrug transport system, ATPase component id=2120377 bin=GWE2_Bacteroidetes_40_15 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein rbh
08E140C01_scaffold_10_curated_14
unknown

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19058..21370
DNA (2313bp) protein (771aa)
Alpha-1,2-mannosidase, putative id=2120375 bin=GWE2_Bacteroidetes_40_15 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
alpha-1,2-mannosidase rbh
08E140C01_scaffold_10_curated_trna_4
unknown

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comp(21448..21530)
DNA (83bp)
transferRNA
08E140C01_scaffold_10_curated_15
unknown

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comp(21622..23289)
DNA (1668bp) protein (556aa)
YidE/YbjL duplication id=2120373 bin=GWE2_Bacteroidetes_40_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein rbh
08E140C01_scaffold_10_curated_16
unknown

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23365..23796
DNA (432bp) protein (144aa)
Large-conductance mechanosensitive channel id=4413285 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
08E140C01_scaffold_10_curated_trna_1
unknown

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23868..23940
DNA (73bp)
transferRNA
08E140C01_scaffold_10_curated_17
unknown

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24330..25478
DNA (1149bp) protein (383aa)
iron-containing alcohol dehydrogenase; K08325 NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] rbh
Uncharacterized protein id=4413286 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
08E140C01_scaffold_10_curated_18
unknown

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25492..25977
DNA (486bp) protein (162aa)
Scaffold protein CheW associated with MCPs of class 40H id=4413287 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
cheW-12; chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
08E140C01_scaffold_10_curated_19
unknown

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25974..27407
DNA (1434bp) protein (478aa)
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
MCP methyltransferase, CheR-type id=2120365 bin=GWE2_Bacteroidetes_40_15 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
08E140C01_scaffold_10_curated_20
unknown

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27404..27913
DNA (510bp) protein (170aa)
CheW protein id=2120363 bin=GWE2_Bacteroidetes_40_15 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
CheW protein; K03408 purine-binding chemotaxis protein CheW
08E140C01_scaffold_10_curated_21
unknown

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27917..29410
DNA (1494bp) protein (498aa)
Methyl-accepting chemotaxis sensory transducer id=2120361 bin=GWE2_Bacteroidetes_40_15 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
methyl-accepting chemotaxis sensory transducer
08E140C01_scaffold_10_curated_22
unknown

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29417..31588
DNA (2172bp) protein (724aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] rbh
CheA signal transduction histidine kinase id=4413291 bin=GWF2_Bacteroidetes_41_61 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
08E140C01_scaffold_10_curated_23
unknown

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31599..32720
DNA (1122bp) protein (374aa)
response regulator receiver (CheY-like) modulated CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
Chemotaxis response regulator protein-glutamate methylesterase id=2120356 bin=GWE2_Bacteroidetes_40_15 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
08E140C01_scaffold_10_curated_24
unknown

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32720..33970
DNA (1251bp) protein (417aa)
response regulator receiver sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] rbh
Response regulator receiver sensor signal transduction histidine kinase id=4413293 bin=GWF2_Bacteroidetes_41_61 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
08E140C01_scaffold_10_curated_25
unknown

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34071..34253
DNA (183bp) protein (61aa)
2Fe-2S iron-sulfur cluster-binding domain protein id=4413294 bin=GWF2_Bacteroidetes_41_61 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
08E140C01_scaffold_10_curated_26
unknown

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comp(34337..34504)
DNA (168bp) protein (56aa)
Ferredoxin id=4143077 bin=GWF2_Bacteroidetes_39_10 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
4Fe-4S ferredoxin
08E140C01_scaffold_10_curated_27
unknown

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34616..35701
DNA (1086bp) protein (362aa)
hypothetical protein AnHS1_02233 id=2120329 bin=GWE2_Bacteroidetes_40_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein rbh
08E140C01_scaffold_10_curated_28
unknown

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35710..36792
DNA (1083bp) protein (361aa)
membrane ATPase/protein kinase id=4205447 bin=GWF2_Bacteroidetes_41_61 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein rbh
Displaying items 1-30 of 448 in total

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