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rifoxyb1_full_scaffold_869

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_869_1
AR15, Woesearchaeaota, DPANN, Archaea

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comp(3..476)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360BC5F
2'-5' RNA ligase Tax=AR15
2'-5' RNA ligase
2'-5' RNA ligase
rifoxyb1_full_scaffold_869_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(523..1614)
DNA (1092bp) protein (364aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 Tax=CG_Woesearch_01
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044964 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptide chain release factor subunit 1
peptide chain release factor subunit 1
rifoxyb1_full_scaffold_869_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1659..4082)
DNA (2424bp) protein (808aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Woesearch_01
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
Valine-tRNA ligase
Valine-tRNA ligase
rifoxyb1_full_scaffold_869_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4126..5016)
DNA (891bp) protein (297aa)
metallo-beta-lactamase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6D1A7
beta-lactamase superfamily hydrolase Tax=CG_Woesearch_02
beta-lactamase superfamily hydrolase
beta-lactamase superfamily hydrolase
rifoxyb1_full_scaffold_869_5

Not on your lists

5036..5740
DNA (705bp) protein (235aa)
UPI00019B05F4 related cluster n=1 Tax=unknown RepID=UPI00019B05F4 id=5103350 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62631.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_869_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(5786..8959)
DNA (3174bp) protein (1058aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis X1 RepID=G0GZZ6_METMI
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_869_7
unknown

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comp(9087..9317)
DNA (231bp) protein (77aa)

This feature has no annotations

rifoxyb1_full_scaffold_869_8
CG_Woesearch_03, Woesearchaeota, Archaea

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9893..10591
DNA (699bp) protein (233aa)
ABC-type multidrug transport system, ATP-ase compoment CAC0241 n=2 Tax=Clostridium RepID=A0PYE1_CLONN id=5103647 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=CG_Woesearch_03
ABC-type multidrug transport system, ATP-ase compoment
ABC-type multidrug transport system, ATP-ase compoment
rifoxyb1_full_scaffold_869_9
CG_Woesearch_03, Woesearchaeota, Archaea

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10588..12270
DNA (1683bp) protein (561aa)
ABC-type multidrug transport system, permease component n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAP8_9EURY id=5102937 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=CG_Woesearch_03
ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component
rifoxyb1_full_scaffold_869_10
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12271..14133)
DNA (1863bp) protein (621aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IR94_THEET rbh
methionyl-tRNA synthetase
methionyl-tRNA synthetase
rifoxyb1_full_scaffold_869_11
unknown

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comp(14217..14528)
DNA (312bp) protein (104aa)

This feature has no annotations

rifoxyb1_full_scaffold_869_12
AR17, Woesearchaeaota, DPANN, Archaea

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14635..15021
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F4F77
hypothetical protein Tax=AR17
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_869_13

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15083..15637
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003609EBC
Uncharacterized protein {ECO:0000313|EMBL:KKK65968.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LemA family protein
LemA family protein
rifoxyb1_full_scaffold_869_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15639..16517
DNA (879bp) protein (293aa)
heat shock protein HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_13_Woesearchaeota_36_6_curated
heat shock protein HtpX (EC:3.4.24.-)
heat shock protein HtpX (EC:3.4.24.-)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI000364D8EA
rifoxyb1_full_scaffold_869_15
unknown

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16584..17600
DNA (1017bp) protein (339aa)

This feature has no annotations

rifoxyb1_full_scaffold_869_16

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comp(17618..17902)
DNA (285bp) protein (95aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Nucleic acid binding OB-fold tRNA/helicase-type id=5799834 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
OB-fold nucleic acid binding protein
OB-fold nucleic acid binding protein
rifoxyb1_full_scaffold_869_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17945..19108)
DNA (1164bp) protein (388aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Woesearch_02
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
replication factor C large subunit
replication factor C large subunit
rifoxyb1_full_scaffold_869_18

Not on your lists

comp(19110..20051)
DNA (942bp) protein (314aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit, replication factor C small subunit {ECO:0000313|EMBL:KHO46156.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rfc; replication factor C small subunit
rfc; replication factor C small subunit
rifoxyb1_full_scaffold_869_19

Not on your lists

comp(20121..20483)
DNA (363bp) protein (121aa)
Putative deoxyribonuclease/rho motif-related TRAM n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF3_NITGG id=5103220 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62501.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_869_20
unknown

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comp(20582..20698)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 20 items

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