ggKbase home page

rifoxyb1_full_scaffold_912

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_912_1
GWC2_OD1_49_12, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW06748.1}; TaxID=1618675 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_49_12.;"
rifoxyb1_full_scaffold_912_2
unknown

Not on your lists

comp(214..918)
DNA (705bp) protein (235aa)

This feature has no annotations

rifoxyb1_full_scaffold_912_3
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1076..1822
DNA (747bp) protein (249aa)
Glycosyltransferase group 2 n=1 Tax=alpha proteobacterium HIMB59 RepID=J9Z2X5_9PROT
glycosyltransferase group 2 Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
glycosyltransferase group 2
glycosyltransferase group 2
rifoxyb1_full_scaffold_912_4
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2020..3696
DNA (1677bp) protein (559aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
rifoxyb1_full_scaffold_912_5

Not on your lists

3771..5180
DNA (1410bp) protein (470aa)
Radical SAM domain protein id=5800501 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
Radical SAM protein {ECO:0000313|EMBL:AJF61832.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
radical SAM domain-containing protein
radical SAM domain-containing protein
rifoxyb1_full_scaffold_912_6
unknown

Not on your lists

comp(5075..5314)
DNA (240bp) protein (80aa)

This feature has no annotations

rifoxyb1_full_scaffold_912_7

Not on your lists

comp(5387..7165)
DNA (1779bp) protein (593aa)
Uncharacterized protein id=5800151 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
Uncharacterized protein {ECO:0000313|EMBL:AJF61482.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
carbamoyl transferase
carbamoyl transferase
rifoxyb1_full_scaffold_912_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7178..7417)
DNA (240bp) protein (80aa)
Uncharacterized protein id=5800152 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
rifoxyb1_full_scaffold_912_9
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

7795..9063
DNA (1269bp) protein (423aa)
Lipolytic protein G-D-S-L family Tax=GWA1_OD1_48_11
rifoxyb1_full_scaffold_912_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

9270..10874
DNA (1605bp) protein (535aa)
radical SAM protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Radical SAM domain protein id=3923652 bin=GWC2_Planctomycetes_45_44 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
radical SAM protein
radical SAM protein
rifoxyb1_full_scaffold_912_11
unknown

Not on your lists

comp(10876..12426)
DNA (1551bp) protein (517aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRW4_METAC id=5103373 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Polysaccharide biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRW4_METAC Tax=AR20
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
rifoxyb1_full_scaffold_912_12
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(12534..13637)
DNA (1104bp) protein (368aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I8R5C9_9THEO
WecE; cell wall biogenesis regulatory protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
WecE; cell wall biogenesis regulatory protein
WecE; cell wall biogenesis regulatory protein
rifoxyb1_full_scaffold_912_13
unknown

Not on your lists

comp(13669..14268)
DNA (600bp) protein (200aa)

This feature has no annotations

rifoxyb1_full_scaffold_912_14
GWE2_TM6_36_25, TM6, Bacteria

Not on your lists

comp(14330..15034)
DNA (705bp) protein (235aa)
UTP-glucose-1-phosphate uridylyltransferase id=4788901 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
UTP-glucose-1-phosphate uridylyltransferase Tax=GWE2_TM6_36_25
putative UTP-glucose-1-phosphate uridylyltransferase
putative UTP-glucose-1-phosphate uridylyltransferase
rifoxyb1_full_scaffold_912_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(15067..16527)
DNA (1461bp) protein (487aa)
Fe-S oxidoreductase Tax=CG_Aenigma_01
methyltransferase id=15193519 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_NOV_55_46 organism_group=Proteobacteria
methyltransferase
methyltransferase
rifoxyb1_full_scaffold_912_16

Not on your lists

16634..17629
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D30A6
Uncharacterized protein {ECO:0000313|EMBL:KKN20788.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase domain-containing protein
oxidoreductase domain-containing protein
rifoxyb1_full_scaffold_912_17
GWA1_OD1_47_11, Parcubacteria, Bacteria

Not on your lists

17657..18325
DNA (669bp) protein (223aa)
Putative Haloacid dehalogenase-like hydrolase Tax=GWA1_OD1_47_11
rifoxyb1_full_scaffold_912_18

Not on your lists

comp(18356..18625)
DNA (270bp) protein (90aa)
Conserved hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JB53_9ARCH
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBH39333.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_912_19
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

18637..19254
DNA (618bp) protein (206aa)
Hexapeptide repeat-containing transferase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQM4_ARCVS
hexapeptide repeat-containing transferase
hexapeptide repeat-containing transferase
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:AEA46586.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
rifoxyb1_full_scaffold_912_20
GWA1_OP11_40_16_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(19259..19864)
DNA (606bp) protein (202aa)
Glycosyl transferase family protein n=1 Tax=uncultured bacterium RepID=K2CXS4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR50620.1}; TaxID=1618405 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_40_16.;"
Displaying 20 items

View Taxonomy