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bjp_ig2102_scaffold_4

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Displaying items 1-30 of 882 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2102_scaffold_4_1
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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2..847
DNA (846bp) protein (282aa)
hypothetical protein Tax=BJP_IG2102_PER_44_74
LigC protein id=5802638 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
S-layer protein
bjp_ig2102_scaffold_4_2
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(842..1399)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D751_9BACT
NTPase Tax=BJP_IG2102_PER_44_74
hypothetical protein
bjp_ig2102_scaffold_4_3
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(1396..2220)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWD2_9BACT
hypothetical protein Tax=BJP_IG2102_PER_44_74
hypothetical protein
bjp_ig2102_scaffold_4_4
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(2277..3434)
DNA (1158bp) protein (386aa)
glycosyl transferase family protein Tax=BJP_IG2102_PER_44_74
Glycosyl transferase family 2 id=2222991 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
glycosyl transferase family protein
bjp_ig2102_scaffold_4_5
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(3427..5610)
DNA (2184bp) protein (728aa)
Putative uncharacterized protein Tax=BJP_IG2102_PER_44_74
Putative uncharacterized protein id=2881227 bin=GWF2_OP3_43_52 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig2102_scaffold_4_6
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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5862..6824
DNA (963bp) protein (321aa)
serine/threonine protein kinase 3, CTR3 Tax=BJP_IG2102_PER_44_74
hypothetical protein id=5097696 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
serine/threonine protein kinase 3, CTR3
bjp_ig2102_scaffold_4_7
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(6795..7430)
DNA (636bp) protein (212aa)
hypothetical protein; K00358 [EC:1.6.99.-] Tax=BJP_IG2102_PER_44_74
Nitroreductase family protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0C4S9_9DELT
hypothetical protein
bjp_ig2102_scaffold_4_8
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

7542..7874
DNA (333bp) protein (111aa)
putative HxlR family transcriptional regulator Tax=BJP_IG2102_PER_44_74
Putative uncharacterized protein id=3934418 bin=GWC2_TM7_48_9 species=Wolinella succinogenes genus=Wolinella taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
putative HxlR family transcriptional regulator
bjp_ig2102_scaffold_4_9
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

7878..8882
DNA (1005bp) protein (335aa)
lysyl-tRNA synthetase-related protein GenX; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=BJP_IG2102_PER_44_74
tRNA synthetase class II (D K and N); K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=5096226 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
lysyl-tRNA synthetase
bjp_ig2102_scaffold_4_10
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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8884..9447
DNA (564bp) protein (188aa)
translation elongation factor P; K02356 elongation factor P Tax=BJP_IG2102_PER_44_74
efp; elongation factor P; K02356 elongation factor P id=5802121 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
translation elongation factor P
bjp_ig2102_scaffold_4_11
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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9453..10721
DNA (1269bp) protein (423aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=BJP_IG2102_PER_44_74
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5090922 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
seryl-tRNA synthetase (EC:6.1.1.11)
bjp_ig2102_scaffold_4_12
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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10733..11524
DNA (792bp) protein (264aa)
Xylose isomerase-like, TIM barrel domain Tax=BJP_IG2102_PER_44_74
Xylose isomerase-like, TIM barrel domain id=5098113 bin=PER_GWF2_43_18 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
bjp_ig2102_scaffold_4_13
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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11524..12180
DNA (657bp) protein (219aa)
ABC transporter, ATP-binding protein n=6 Tax=Clostridium difficile RepID=D5Q2A9_CLODI
antimicrobial peptide ABC transporter ATPase Tax=BJP_IG2102_PER_44_74
antimicrobial peptide ABC transporter ATPase
bjp_ig2102_scaffold_4_14
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

12182..13411
DNA (1230bp) protein (410aa)
ABC transporter permease Tax=BJP_IG2102_PER_44_74
ABC transporter permease; K02004 putative ABC transport system permease protein id=5090919 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ABC transporter permease
bjp_ig2102_scaffold_4_15
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(13458..15932)
DNA (2475bp) protein (825aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003467469
hypothetical protein Tax=BJP_IG2102_PER_44_74
hypothetical protein
bjp_ig2102_scaffold_4_16
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(16054..16368)
DNA (315bp) protein (105aa)
Tax=BJP_IG2102_PER_44_74
bjp_ig2102_scaffold_4_17
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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16549..17220
DNA (672bp) protein (224aa)
Tax=BJP_IG2102_PER_44_74
bjp_ig2102_scaffold_4_18
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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17340..20957
DNA (3618bp) protein (1206aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=BJP_IG2102_PER_44_74
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=5090918 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
bjp_ig2102_scaffold_4_19
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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20994..21515
DNA (522bp) protein (174aa)
ssb; single-strand DNA-binding protein; K03111 single-strand DNA-binding protein Tax=BJP_IG2102_PER_44_74
single-strand-binding protein; K03111 single-strand DNA-binding protein id=5097525 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
hypothetical protein
bjp_ig2102_scaffold_4_20
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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21552..25445
DNA (3894bp) protein (1298aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=BJP_IG2102_PER_44_74
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5090916 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
DNA-directed RNA polymerase subunit beta'
bjp_ig2102_scaffold_4_21
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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25522..25944
DNA (423bp) protein (141aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=BJP_IG2102_PER_44_74
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5093303 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
rpsL; 30S ribosomal protein S12
bjp_ig2102_scaffold_4_22
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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25956..26402
DNA (447bp) protein (149aa)
30S ribosomal protein S7 n=1 Tax=uncultured bacterium RepID=K1ZKN4_9BACT
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=BJP_IG2102_PER_44_74
30S ribosomal protein S7
bjp_ig2102_scaffold_4_23
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(26490..27386)
DNA (897bp) protein (299aa)
RNA polymerase sigma factor n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QFT1_DESAH
rpoH; protein RpoH; K03089 RNA polymerase sigma-32 factor Tax=BJP_IG2102_PER_44_74
rpoH; protein RpoH
bjp_ig2102_scaffold_4_24
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(27353..27541)
DNA (189bp) protein (63aa)
Tax=BJP_IG2102_PER_44_74
bjp_ig2102_scaffold_4_25
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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27568..29658
DNA (2091bp) protein (697aa)
fusA-3; translation elongation factor G; K02355 elongation factor G Tax=BJP_IG2102_PER_44_74
translation elongation factor G; K02355 elongation factor G id=5097531 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
fusA-3; translation elongation factor G
bjp_ig2102_scaffold_4_26
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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29838..31028
DNA (1191bp) protein (397aa)
Elongation factor Tu n=1 Tax=uncultured bacterium RepID=K2ANQ5_9BACT
tufA; elongation factor Tu; K02358 elongation factor Tu Tax=BJP_IG2102_PER_44_74
tufA; elongation factor Tu
bjp_ig2102_scaffold_4_27
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


31317..31637
DNA (321bp) protein (107aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2B3U3_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=BJP_IG2102_PER_44_74
rpsJ; 30S ribosomal protein S10
bjp_ig2102_scaffold_4_28
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


31939..32526
DNA (588bp) protein (196aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802063 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rplC; 50S ribosomal protein L3
bjp_ig2102_scaffold_4_29
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


32532..33167
DNA (636bp) protein (212aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802064 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
50S ribosomal protein L4
bjp_ig2102_scaffold_4_30
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


33170..33478
DNA (309bp) protein (103aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 id=5094428 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rplW; 50S ribosomal protein L23
Displaying items 1-30 of 882 in total

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