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rifcsphigho2_01_scaffold_1903

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_1903_1
unknown

Not on your lists

7..363
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1903_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

417..1142
DNA (726bp) protein (242aa)
proteasome endopeptidase complex, alpha subunit (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_02
Proteasome subunit alpha id=5800797 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proteasome subunit alpha
rifcsphigho2_01_scaffold_1903_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1180..1533)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_01_scaffold_1903_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1478..2893)
DNA (1416bp) protein (472aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Pacearch_06
Protein translocase subunit SecY
rifcsphigho2_01_scaffold_1903_5
unknown

Not on your lists

3037..3813
DNA (777bp) protein (259aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1903_6

Not on your lists


comp(4143..4580)
DNA (438bp) protein (146aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
rifcsphigho2_01_scaffold_1903_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(4580..4996)
DNA (417bp) protein (139aa)
ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=CG_Pacearch_06
rpl30p; 50S ribosomal protein L30
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5046860 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_1903_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(4993..5799)
DNA (807bp) protein (269aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Pacearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
rifcsphigho2_01_scaffold_1903_9

Not on your lists


comp(5774..6280)
DNA (507bp) protein (169aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifcsphigho2_01_scaffold_1903_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(6277..6681)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00036CDE30
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=CG_Pacearch_02
rpl19e; 50S ribosomal protein L19
rifcsphigho2_01_scaffold_1903_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(6678..7028)
DNA (351bp) protein (117aa)
50S ribosomal protein L32e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL32_METKA
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=CG_Pacearch_03
rpl32e; 50S ribosomal protein L32
rifcsphigho2_01_scaffold_1903_12

Not on your lists


comp(7028..7570)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD84_METIK
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS11965.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
rifcsphigho2_01_scaffold_1903_13

Not on your lists


comp(7572..7946)
DNA (375bp) protein (125aa)
30S ribosomal protein S8 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD85_METIK
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS11966.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
rifcsphigho2_01_scaffold_1903_14
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists


comp(7948..8178)
DNA (231bp) protein (77aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5041773 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
rifcsphigho2_01_scaffold_1903_15

Not on your lists


comp(8175..8690)
DNA (516bp) protein (172aa)
50S ribosomal protein L5 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD2_METFV
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS11967.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsphigho2_01_scaffold_1903_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


comp(8687..9307)
DNA (621bp) protein (207aa)
30S ribosomal protein S4e n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RS4E_ARCFU
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e Tax=CG_Pacearch_03
Ribosomal protein S4E
rifcsphigho2_01_scaffold_1903_17

Not on your lists


comp(9307..9714)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
rifcsphigho2_01_scaffold_1903_18
unknown

Not on your lists

comp(9711..10106)
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1903_19

Not on your lists


comp(10103..10504)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P
rifcsphigho2_01_scaffold_1903_20

Not on your lists


comp(10504..10821)
DNA (318bp) protein (106aa)
30S ribosomal protein S17P n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RT69_METFO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein S17P Rps17p
rifcsphigho2_01_scaffold_1903_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10823..11122)
DNA (300bp) protein (100aa)
translation initiation factor Sui1; K03113 translation initiation factor 1 Tax=CG_Pacearch_06
translation initiation factor SUI1; K03113 translation initiation factor 1 id=5041767 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translation initiation factor 1 (eif-1/sui1)
rifcsphigho2_01_scaffold_1903_22
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11126..11326)
DNA (201bp) protein (67aa)
Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_1903_23

Not on your lists


comp(11326..12018)
DNA (693bp) protein (231aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GVV9_9ZZZZ rbh
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99665.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
rifcsphigho2_01_scaffold_1903_24

Not on your lists


comp(12018..12599)
DNA (582bp) protein (194aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_1903_25

Not on your lists


comp(12601..13005)
DNA (405bp) protein (135aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RS19_METBF
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S15e (S19p)
rifcsphigho2_01_scaffold_1903_26

Not on your lists


comp(13005..13700)
DNA (696bp) protein (232aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS11972.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
rifcsphigho2_01_scaffold_1903_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(13702..13944)
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Pacearchaeota_36_9_curated
50S ribosomal protein L23P
rifcsphigho2_01_scaffold_1903_28

Not on your lists


comp(13934..14710)
DNA (777bp) protein (259aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS11973.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifcsphigho2_01_scaffold_1903_29

Not on your lists


comp(14707..15639)
DNA (933bp) protein (311aa)
50S ribosomal protein L3 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA id=5103252 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS11974.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
rifcsphigho2_01_scaffold_1903_30
unknown

Not on your lists

comp(15890..16267)
DNA (378bp) protein (126aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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