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rifcsphigho2_01_scaffold_3374

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3374_1
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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217..849
DNA (633bp) protein (211aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5X8V6_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KIE17857.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K
haloacid dehalogenase domain-containing protein hydrolase
rifcsphigho2_01_scaffold_3374_2

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862..6177
DNA (5316bp) protein (1772aa)
Subtilisin-like serine proteases n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RBJ2_THETN id=5103550 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H4_L07895 {ECO:0000313|EMBL:GAG79470.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Subtilisin-like protein serine protease
rifcsphigho2_01_scaffold_3374_3

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comp(6214..6810)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
Uncharacterized protein {ECO:0000313|EMBL:KKK79956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_01_scaffold_3374_4
unknown

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comp(6856..7332)
DNA (477bp) protein (159aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_5
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(7333..8688)
DNA (1356bp) protein (452aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
GTP-binding signal recognition particle SRP54 G-domain-containing protein; K03106 signal recognition particle subunit SRP54 Tax=CG_Pacearch_03
SRP54-type protein, GTPase protein
rifcsphigho2_01_scaffold_3374_6
unknown

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comp(9025..9513)
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_7
unknown

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comp(9553..12063)
DNA (2511bp) protein (837aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_8
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12173..12646
DNA (474bp) protein (158aa)
NUDIX hydrolase n=2 Tax=Saccharopolyspora erythraea RepID=A4FGB1_SACEN
NUDIX hydrolase
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EQD84865.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
rifcsphigho2_01_scaffold_3374_9
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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12669..13184
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000374FAA4
diadenosine tetraphosphatehydrolase Tax=BJP_IG2102_PER_44_74
hypothetical protein
rifcsphigho2_01_scaffold_3374_10
CG_Pacearch_03, Pacearchaeota, Archaea

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13354..13779
DNA (426bp) protein (142aa)
30S ribosomal protein S6e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF39_METIK
Marine sediment metagenome DNA, contig: S03H2_S02615 Tax=CG_Pacearch_03
30S ribosomal protein S6e
rifcsphigho2_01_scaffold_3374_11
unknown

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13845..14564
DNA (720bp) protein (240aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


14608..15789
DNA (1182bp) protein (394aa)
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 Tax=CG_Pacearch_03
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation initiation factor 2 subunit gamma (aeif-2g)
rifcsphigho2_01_scaffold_3374_13

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comp(15931..17010)
DNA (1080bp) protein (360aa)
Dihydroorotase, multifunctional complex type n=3 Tax=Treponema denticola RepID=M2BPV5_TREDN
Uncharacterized protein {ECO:0000313|EMBL:KKN96829.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotase
rifcsphigho2_01_scaffold_3374_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

17095..20058
DNA (2964bp) protein (988aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Pacearch_03
UvrD/REP helicase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6Q7_METEZ
UvrD/REP helicase
rifcsphigho2_01_scaffold_3374_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20404..21018)
DNA (615bp) protein (205aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_3374_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

21118..21624
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369275E
id=5051515 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_3374_17
unknown

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21711..22307
DNA (597bp) protein (199aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_18
CG_Pacearch_06, Pacearchaeota, Archaea

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22366..22527
DNA (162bp) protein (54aa)
RNA-directed DNA polymerase Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_3374_19
unknown

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comp(22626..23045)
DNA (420bp) protein (140aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3374_20
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

23052..23792
DNA (741bp) protein (247aa)
Tax=GWA1_OD1_36_12
rifcsphigho2_01_scaffold_3374_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(23815..25452)
DNA (1638bp) protein (546aa)
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU id=5103302 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Surface layer protein B SlgB-2
Surface layer protein B (SlgB-2) Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_3374_22
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25464..26096)
DNA (633bp) protein (211aa)
hypothetical protein
id=5103303 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Displaying 22 items

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